QuakeLabeler is a Python package to create and manage your seismic training data, processes, and visualization in a single place — so you can focus on building the next big thing.

Last update: Nov 04, 2022

Overview

QuakeLabeler

Quake Labeler was born from the need for seismologists and developers who are not AI specialists to easily, quickly, and independently build and visualize their training data set.

Introduction

QuakeLabeler is a Python package to customize, build and manage your seismic training data, processes, and visualization in a single place — so you can focus on building the next big thing. Current functionalities include retrieving waveforms from data centers, customizing seismic samples, auto-building datasets, preprocessing and augmenting for labels, and visualizing data distribution. The code helps all levels of AI developers and seismology researchers for querying and building their own earthquake datasets and can be used through an interactive command-line interface with little knowledge of Python.

Installation, Usage, documentation and scripts are described at https://maihao14.github.io/QuakeLabeler/

Author: Hao Mai(Developer and Maintainer) & Pascal Audet (Developer and Maintainer)

Installation

Conda environment

We recommend creating a custom conda environment where QuakeLabeler can be installed along with its dependencies.

Create a environment called ql and install pygmt:

conda create -n ql python=3.8 pygmt -c conda-forge

Activate the newly created environment:

conda activate ql

Installing from source

Download or clone the repository:

git clone https://github.com/maihao14/QuakeLabeler.git
cd QuakeLabeler

pip install .

If you work in development mode, use the -e argument as pip install -e .

Running the scripts

Create a work folder where you will run the scripts that accompany QuakeLabeler. For example:

mkdir ~/WorkFolder
cd WorkFolder

Run QuakeLabeler. Input QuakeLabeler to macOS terminal or Windows consoles:

QuakeLabeler

Or input quakelabeler also works:

quakelabeler

A QuakeLabeler welcome interface will be loading:

(ql) [email protected] QuakeLabeler % QuakeLabeler
Welcome to QuakeLabeler----Fast AI Earthquake Dataset Deployment Tool!
QuakeLabeler provides multiple modes for different levels of Seismic AI researchers

[Beginner] mode -- well prepared case studies;
[Advanced] mode -- produce earthquake samples based on Customized parameters.

Contributing

All constructive contributions are welcome, e.g. bug reports, discussions or suggestions for new features. You can either open an issue on GitHub or make a pull request with your proposed changes. Before making a pull request, check if there is a corresponding issue opened and reference it in the pull request. If there isn't one, it is recommended to open one with your rationale for the change. New functionality or significant changes to the code that alter its behavior should come with corresponding tests and documentation. If you are new to contributing, you can open a work-in-progress pull request and have it iteratively reviewed. Suggestions for improvements (speed, accuracy, etc.) are also welcome.

Spam your friends and famly and when you do your famly will disown you and you will have no friends.

SpamBot9000 Spam your friends and family and when you do your family will disown you and you will have no friends. Terms of Use Disclaimer: Please onl

0 Jun 9, 2022

The code for our paper "NSP-BERT: A Prompt-based Zero-Shot Learner Through an Original Pre-training Task —— Next Sentence Prediction"

201 Nov 21, 2022

Ever felt tired after preprocessing the dataset, and not wanting to write any code further to train your model? Ever encountered a situation where you wanted to record the hyperparameters of the trained model and able to retrieve it afterward? Models Playground is here to help you do that. Models playground allows you to train your models right from the browser.

Models Playground 🗂️ Upload a Preprocessed Dataset 🌠 Choose whether to perform Classification or Regression 🦹 Enter the Dependent Variable ?

19 Dec 10, 2022

7th place solution of Human Protein Atlas - Single Cell Classification on Kaggle

kaggle-hpa-2021-7th-place-solution Code for 7th place solution of Human Protein Atlas - Single Cell Classification on Kaggle. A description of the met

8 Jul 9, 2021

Kaggle | 9th place single model solution for TGS Salt Identification Challenge

UNet for segmenting salt deposits from seismic images with PyTorch. General We, tugstugi and xuyuan, have participated in the Kaggle competition TGS S

276 Dec 20, 2022

Source codes of CenterTrack++ in 2021 ICME Workshop on Big Surveillance Data Processing and Analysis

MOT Tracked object bounding box association (CenterTrack++) New association method based on CenterTrack. Two new branches (Tracked Size and IOU) are a

36 Oct 4, 2022

AI Flow is an open source framework that bridges big data and artificial intelligence.

Flink AI Flow Introduction Flink AI Flow is an open source framework that bridges big data and artificial intelligence. It manages the entire machine

144 Dec 30, 2022

In-Place Activated BatchNorm for Memory-Optimized Training of DNNs

In-Place Activated BatchNorm In-Place Activated BatchNorm for Memory-Optimized Training of DNNs In-Place Activated BatchNorm (InPlace-ABN) is a novel

1.3k Dec 29, 2022

PyGAD, a Python 3 library for building the genetic algorithm and training machine learning algorithms (Keras & PyTorch).

PyGAD: Genetic Algorithm in Python PyGAD is an open-source easy-to-use Python 3 library for building the genetic algorithm and optimizing machine lear

1.1k Dec 26, 2022

Comments

QuakeLabeler ModuleNotFoundError

I followed the installation instructions to install the fascinating QuakeLabeler package But I encountered an error as follows Traceback (most recent call last): File "/home/panxiong/anaconda3/envs/ql/bin/QuakeLabeler", line 5, in <module> from quakelabeler.scripts.QuakeLabeler import main ModuleNotFoundError: No module named 'quakelabeler.scripts' Please give me a solution, thanks.

opened by PANXIONG-CN 2
Error loading GMT shared library

Hello,

I was trying to use the QuakeLabeler package on some data and when I tried to run it I got the following error:

pygmt.exceptions.GMTCLibNotFoundError: Error loading GMT shared library at 'libgmt.so'. libgmt.so: cannot open shared object file: No such file or directory

I saw that there were some responses to a similar question in the past, but they all involved using conda, which I don't use at it interferes with other libraries I use.

So far I tried using:

pip install pygmt

as well as GMT:

sudo apt-get install gmt gmt-dcw gmt-gshhg sudo apt-get install ghostscript Unfortunately, it did not work.

Any suggestions would be appreciated

opened by sbrent88 1
the problem of QuakeLabeler used in the Ubuntu

After I create the python environment needed by QuakeLabeler and install it in my Ubuntu computer, there was the problem, "AttributeError: 'numpy.int64' object has no attribute 'split'" when I execute QuakeLabeler (quakelabeler) in the terminal.

“”“ Traceback (most recent call last): File "/home/xxx/anaconda3/envs/slc/bin/QuakeLabeler", line 33, in sys.exit(load_entry_point('QuakeLabeler', 'console_scripts', 'QuakeLabeler')()) File "/home/xxx/anaconda3/envs/slc/bin/QuakeLabeler", line 25, in importlib_load_entry_point return next(matches).load() File "/home/xxx/anaconda3/envs/slc/lib/python3.8/importlib/metadata.py", line 77, in load module = import_module(match.group('module')) File "/home/xxx/anaconda3/envs/slc/lib/python3.8/importlib/init.py", line 127, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "", line 1014, in _gcd_import File "", line 991, in _find_and_load File "", line 961, in _find_and_load_unlocked File "", line 219, in _call_with_frames_removed File "", line 1014, in _gcd_import File "", line 991, in _find_and_load File "", line 961, in _find_and_load_unlocked File "", line 219, in _call_with_frames_removed File "", line 1014, in _gcd_import File "", line 991, in _find_and_load File "", line 975, in _find_and_load_unlocked File "", line 671, in _load_unlocked File "", line 843, in exec_module File "", line 219, in _call_with_frames_removed File "/home/xxx/EQ_Detection/QuakeLabeler/quakelabeler/init.py", line 5, in from .classes import QuakeLabeler, Interactive, CustomSamples, QueryArrival, BuiltInCatalog, MergeMetadata, GlobalMaps File "/home/xxx/EQ_Detection/QuakeLabeler/quakelabeler/classes.py", line 35, in from obspy.core.utcdatetime import UTCDateTime File "/home/xxx/.local/lib/python3.8/site-packages/obspy/init.py", line 39, in from obspy.core.utcdatetime import UTCDateTime # NOQA File "/home/xxx/.local/lib/python3.8/site-packages/obspy/core/init.py", line 124, in from obspy.core.utcdatetime import UTCDateTime # NOQA File "/home/xxx/.local/lib/python3.8/site-packages/obspy/core/utcdatetime.py", line 27, in from obspy.core.util.deprecation_helpers import ObsPyDeprecationWarning File "/home/xxx/.local/lib/python3.8/site-packages/obspy/core/util/init.py", line 27, in from obspy.core.util.base import (ALL_MODULES, DEFAULT_MODULES, File "/home/xxx/.local/lib/python3.8/site-packages/obspy/core/util/base.py", line 36, in from obspy.core.util.misc import to_int_or_zero, buffered_load_entry_point File "/home/xxx/.local/lib/python3.8/site-packages/obspy/core/util/misc.py", line 214, in loadtxt(np.array([0]), ndmin=1) File "/home/xxx/anaconda3/envs/slc/lib/python3.8/site-packages/numpy/lib/npyio.py", line 1086, in loadtxt ncols = len(usecols or split_line(first_line)) File "/home/xxx/anaconda3/envs/slc/lib/python3.8/site-packages/numpy/lib/npyio.py", line 977, in split_line line = line.split(comment, 1)[0] AttributeError: 'numpy.int64' object has no attribute 'split' "”"

opened by Damin1909 3

Releases(v1.0.1)

v1.0.1(Dec 23, 2021)

QuakeLabeler-1.0.1.tar.gz
Source code(tar.gz)
Source code(zip)
v0.0.2(Jun 8, 2021)

Source code(tar.gz)
Source code(zip)
v0.0.1(Jun 8, 2021)

Source code(tar.gz)
Source code(zip)

Owner

Hao Mai

GitHub Repository

A simple Python library for stochastic graphical ecological models

What is Viridicle? Viridicle is a library for simulating stochastic graphical ecological models. It implements the continuous time models described in

0 Dec 04, 2021

CondNet: Conditional Classifier for Scene Segmentation

CondNet: Conditional Classifier for Scene Segmentation Introduction The fully convolutional network (FCN) has achieved tremendous success in dense vis

31 Jul 22, 2022

Blender add-on: Add to Cameras menu: View → Camera, View → Add Camera, Camera → View, Previous Camera, Next Camera

Blender add-on: Camera additions In 3D view, it adds these actions to the View|Cameras menu: View → Camera : set the current camera to the 3D view Vie

11 Feb 08, 2022

This repository is the official implementation of Open Rule Induction. This paper has been accepted to NeurIPS 2021.

Open Rule Induction This repository is the official implementation of Open Rule Induction. This paper has been accepted to NeurIPS 2021. Abstract Rule

16 Nov 14, 2022

Full Transformer Framework for Robust Point Cloud Registration with Deep Information Interaction

Full Transformer Framework for Robust Point Cloud Registration with Deep Information Interaction. arxiv This repository contains python scripts for tr

12 Dec 12, 2022

Torch-mutable-modules - Use in-place and assignment operations on PyTorch module parameters with support for autograd

Torch Mutable Modules Use in-place and assignment operations on PyTorch module p

7 Jun 06, 2022

Pytorch reimplementation of the Vision Transformer (An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale)

Vision Transformer Pytorch reimplementation of Google's repository for the ViT model that was released with the paper An Image is Worth 16x16 Words: T

1.4k Dec 28, 2022

QuakeLabeler is a Python package to create and manage your seismic training data, processes, and visualization in a single place — so you can focus on building the next big thing.

Related tags

Overview

QuakeLabeler

Introduction

Installation

Conda environment

Installing from source

Running the scripts

Contributing

You might also like...

Spam your friends and famly and when you do your famly will disown you and you will have no friends.

The code for our paper "NSP-BERT: A Prompt-based Zero-Shot Learner Through an Original Pre-training Task —— Next Sentence Prediction"

7th place solution of Human Protein Atlas - Single Cell Classification on Kaggle

Kaggle | 9th place single model solution for TGS Salt Identification Challenge

Source codes of CenterTrack++ in 2021 ICME Workshop on Big Surveillance Data Processing and Analysis

AI Flow is an open source framework that bridges big data and artificial intelligence.

In-Place Activated BatchNorm for Memory-Optimized Training of DNNs

PyGAD, a Python 3 library for building the genetic algorithm and training machine learning algorithms (Keras & PyTorch).

Comments

QuakeLabeler ModuleNotFoundError

Error loading GMT shared library

the problem of QuakeLabeler used in the Ubuntu

Releases(v1.0.1)

v1.0.1(Dec 23, 2021)

v0.0.2(Jun 8, 2021)

v0.0.1(Jun 8, 2021)

Owner

Hao Mai

A simple Python library for stochastic graphical ecological models

CondNet: Conditional Classifier for Scene Segmentation

Blender add-on: Add to Cameras menu: View → Camera, View → Add Camera, Camera → View, Previous Camera, Next Camera

This repository is the official implementation of Open Rule Induction. This paper has been accepted to NeurIPS 2021.

Full Transformer Framework for Robust Point Cloud Registration with Deep Information Interaction

Torch-mutable-modules - Use in-place and assignment operations on PyTorch module parameters with support for autograd

Pytorch reimplementation of the Vision Transformer (An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale)

🔥 TensorFlow Code for technical report: "YOLOv3: An Incremental Improvement"

Object Detection Projekt in GKI WS2021/22

This repository contains source code for the Situated Interactive Language Grounding (SILG) benchmark

Source code for our Paper "Learning in High-Dimensional Feature Spaces Using ANOVA-Based Matrix-Vector Multiplication"

Think Big, Teach Small: Do Language Models Distil Occam’s Razor?

The code for Bi-Mix: Bidirectional Mixing for Domain Adaptive Nighttime Semantic Segmentation

Code repository for the work "Multi-Domain Incremental Learning for Semantic Segmentation", accepted at WACV 2022

Code for ICCV2021 paper SPEC: Seeing People in the Wild with an Estimated Camera

Implementation of our paper 'RESA: Recurrent Feature-Shift Aggregator for Lane Detection' in AAAI2021.

YOLO-v5 기반 단안 카메라의 영상을 활용해 차간 거리를 일정하게 유지하며 주행하는 Adaptive Cruise Control 기능 구현

Code release for "Detecting Twenty-thousand Classes using Image-level Supervision".

Implementation of the federated dual coordinate descent (FedDCD) method.

JFB: Jacobian-Free Backpropagation for Implicit Models