A library to inspect itermediate layers of PyTorch models.

Overview

A library to inspect itermediate layers of PyTorch models.

Why?

It's often the case that we want to inspect intermediate layers of a model without modifying the code e.g. visualize attention matrices of language models, get values from an intermediate layer to feed to another layer, or applying a loss function to intermediate layers.

Install

$ pip install surgeon-pytorch

PyPI - Python Version

Usage

Inspect

Given a PyTorch model we can display all layers using get_layers:

import torch
import torch.nn as nn

from surgeon_pytorch import Inspect, get_layers

class SomeModel(nn.Module):

    def __init__(self):
        super().__init__()
        self.layer1 = nn.Linear(5, 3)
        self.layer2 = nn.Linear(3, 2)
        self.layer3 = nn.Linear(2, 1)

    def forward(self, x):
        x1 = self.layer1(x)
        x2 = self.layer2(x1)
        y = self.layer3(x2)
        return y


model = SomeModel()
print(get_layers(model)) # ['layer1', 'layer2', 'layer3']

Then we can wrap our model to be inspected using Inspect and in every forward call the new model we will also output the provided layer outputs (in second return value):

model_wrapped = Inspect(model, layer='layer2')
x = torch.rand(1, 5)
y, x2 = model_wrapped(x)
print(x2) # tensor([[-0.2726,  0.0910]], grad_fn=<AddmmBackward0>)

We can also provide a list of layers:

model_wrapped = Inspect(model, layer=['layer1', 'layer2'])
x = torch.rand(1, 5)
y, [x1, x2] = model_wrapped(x)
print(x1) # tensor([[ 0.1739,  0.3844, -0.4724]], grad_fn=<AddmmBackward0>)
print(x2) # tensor([[-0.2238,  0.0107]], grad_fn=<AddmmBackward0>)

Or a dictionary to get named outputs:

model_wrapped = Inspect(model, layer={'x1': 'layer1', 'x2': 'layer2'})
x = torch.rand(1, 5)
y, layers = model_wrapped(x)
print(layers)
"""
{
    'x1': tensor([[ 0.3707,  0.6584, -0.2970]], grad_fn=<AddmmBackward0>),
    'x2': tensor([[-0.1953, -0.3408]], grad_fn=<AddmmBackward0>)
}
"""

TODO

  • add extract function to get intermediate block
You might also like...
Ever felt tired after preprocessing the dataset, and not wanting to write any code further to train your model? Ever encountered a situation where you wanted to record the hyperparameters of the trained model and able to retrieve it afterward? Models Playground is here to help you do that. Models playground allows you to train your models right from the browser. pyhsmm - library for approximate unsupervised inference in Bayesian Hidden Markov Models (HMMs) and explicit-duration Hidden semi-Markov Models (HSMMs), focusing on the Bayesian Nonparametric extensions, the HDP-HMM and HDP-HSMM, mostly with weak-limit approximations. PyTorch implementation and pretrained models for XCiT models. See XCiT: Cross-Covariance Image Transformer
TorchGeo is a PyTorch domain library, similar to torchvision, that provides datasets, transforms, samplers, and pre-trained models specific to geospatial data.

TorchGeo is a PyTorch domain library, similar to torchvision, that provides datasets, transforms, samplers, and pre-trained models specific to geospatial data.

Pytorch library for end-to-end transformer models training and serving

Pytorch library for end-to-end transformer models training and serving

This repository provides an efficient PyTorch-based library for training deep models.

An Efficient Library for Training Deep Models This repository provides an efficient PyTorch-based library for training deep models. Installation Make

TorchMultimodal is a PyTorch library for training state-of-the-art multimodal multi-task models at scale.

TorchMultimodal (Alpha Release) Introduction TorchMultimodal is a PyTorch library for training state-of-the-art multimodal multi-task models at scale.

Objective of the repository is to learn and build machine learning models using Pytorch. 30DaysofML Using Pytorch
Objective of the repository is to learn and build machine learning models using Pytorch. 30DaysofML Using Pytorch

30 Days Of Machine Learning Using Pytorch Objective of the repository is to learn and build machine learning models using Pytorch. List of Algorithms

Pretrained SOTA Deep Learning models, callbacks and more for research and production with PyTorch Lightning and PyTorch
Pretrained SOTA Deep Learning models, callbacks and more for research and production with PyTorch Lightning and PyTorch

Pretrained SOTA Deep Learning models, callbacks and more for research and production with PyTorch Lightning and PyTorch

Comments
  • Use one backbone with different heads

    Use one backbone with different heads

    Is it possible to save the results from the backbone and apply them on the heads of the all the other models. My goal was to try to save time by avoiding repeating the backbone part. Instead of running the 3 complete models (left), only run the backbone 1 time and switch only the heads for the 3 models (right), therefore not repeating executing the backbone every time in yolov5 model.

    Thank you for the help!

    question 
    opened by brunopatricio2012 4
  • Support for DataParallel?

    Support for DataParallel?

    Hi, I noticed that the current version does not support parallel models (at least those created using torch.nn.DataParallel) since the forward hook does not differentiate between the different copies of the model and a model wrapped with Inspect will just return the intermediate features of the last copy of the parallelized model to run.

    Are you planning on fixing this issue/supporting this use case?

    opened by zimmerrol 1
Releases(0.0.4)
Owner
archinet.ai
AI Research Group
archinet.ai
RoboDesk A Multi-Task Reinforcement Learning Benchmark

RoboDesk A Multi-Task Reinforcement Learning Benchmark If you find this open source release useful, please reference in your paper: @misc{kannan2021ro

Google Research 66 Oct 07, 2022
Official Pytorch implementation of "Learning Debiased Representation via Disentangled Feature Augmentation (Neurips 2021, Oral)"

Learning Debiased Representation via Disentangled Feature Augmentation (Neurips 2021, Oral): Official Project Webpage This repository provides the off

Kakao Enterprise Corp. 68 Dec 17, 2022
Simple-Image-Classification - Simple Image Classification Code (PyTorch)

Simple-Image-Classification Simple Image Classification Code (PyTorch) Yechan Kim This repository contains: Python3 / Pytorch code for multi-class ima

Yechan Kim 8 Oct 29, 2022
Dogs classification with Deep Metric Learning using some popular losses

Tsinghua Dogs classification with Deep Metric Learning 1. Introduction Tsinghua Dogs dataset Tsinghua Dogs is a fine-grained classification dataset fo

QuocThangNguyen 45 Nov 09, 2022
DiAne is a smart fuzzer for IoT devices

Diane Diane is a fuzzer for IoT devices. Diane works by identifying fuzzing triggers in the IoT companion apps to produce valid yet under-constrained

seclab 28 Jan 04, 2023
Code for 2021 NeurIPS --- Towards Multi-Grained Explainability for Graph Neural Networks

ReFine: Multi-Grained Explainability for GNNs We are trying hard to update the code, but it may take a while to complete due to our tight schedule rec

Shirley (Ying-Xin) Wu 47 Dec 16, 2022
A medical imaging framework for Pytorch

Welcome to MedicalTorch MedicalTorch is an open-source framework for PyTorch, implementing an extensive set of loaders, pre-processors and datasets fo

Christian S. Perone 799 Jan 03, 2023
RSC-Net: 3D Human Pose, Shape and Texture from Low-Resolution Images and Videos

RSC-Net: 3D Human Pose, Shape and Texture from Low-Resolution Images and Videos Implementation for "3D Human Pose, Shape and Texture from Low-Resoluti

XiangyuXu 42 Nov 10, 2022
Differentiable Surface Triangulation

Differentiable Surface Triangulation This is our implementation of the paper Differentiable Surface Triangulation that enables optimization for any pe

61 Dec 07, 2022
Mapping Conditional Distributions for Domain Adaptation Under Generalized Target Shift

This repository contains the official code of OSTAR in "Mapping Conditional Distributions for Domain Adaptation Under Generalized Target Shift" (ICLR 2022).

Matthieu Kirchmeyer 5 Dec 06, 2022
PaddleBoBo是基于PaddlePaddle和PaddleSpeech、PaddleGAN等开发套件的虚拟主播快速生成项目

PaddleBoBo - 元宇宙时代,你也可以动手做一个虚拟主播。 PaddleBoBo是基于飞桨PaddlePaddle深度学习框架和PaddleSpeech、PaddleGAN等开发套件的虚拟主播快速生成项目。PaddleBoBo致力于简单高效、可复用性强,只需要一张带人像的图片和一段文字,就能

502 Jan 08, 2023
Code To Tune or Not To Tune? Zero-shot Models for Legal Case Entailment.

COLIEE 2021 - task 2: Legal Case Entailment This repository contains the code to reproduce NeuralMind's submissions to COLIEE 2021 presented in the pa

NeuralMind 13 Dec 16, 2022
General-purpose program synthesiser

DeepSynth General-purpose program synthesiser. This is the repository for the code of the paper "Scaling Neural Program Synthesis with Distribution-ba

Nathanaël Fijalkow 24 Oct 23, 2022
AOT (Associating Objects with Transformers) in PyTorch

An efficient modular implementation of Associating Objects with Transformers for Video Object Segmentation in PyTorch

162 Dec 14, 2022
AirPose: Multi-View Fusion Network for Aerial 3D Human Pose and Shape Estimation

AirPose AirPose: Multi-View Fusion Network for Aerial 3D Human Pose and Shape Estimation Check the teaser video This repository contains the code of A

Robot Perception Group 41 Dec 05, 2022
Count GitHub Stars ⭐

Count GitHub Stars per Day ⭐ Track GitHub stars per day over a date range to measure the open-source popularity of different repositories. Requirement

Ultralytics 20 Nov 20, 2022
Tensorflow implementation of ID-Unet: Iterative Soft and Hard Deformation for View Synthesis.

ID-Unet: Iterative-view-synthesis(CVPR2021 Oral) Tensorflow implementation of ID-Unet: Iterative Soft and Hard Deformation for View Synthesis. Overvie

17 Aug 23, 2022
Using pytorch to implement unet network for liver image segmentation.

Using pytorch to implement unet network for liver image segmentation.

zxq 1 Dec 17, 2021
A series of Python scripts to access measurements from Fluke 28X meters. Fluke IR Remote Interface required.

Fluke289_data_access A series of Python scripts to access measurements from Fluke 28X meters. Fluke IR Remote Interface required. Created from informa

3 Dec 08, 2022
This is an official implementation for "Video Swin Transformers".

Video Swin Transformer By Ze Liu*, Jia Ning*, Yue Cao, Yixuan Wei, Zheng Zhang, Stephen Lin and Han Hu. This repo is the official implementation of "V

Swin Transformer 981 Jan 03, 2023