Equivariant Imaging: Learning Beyond the Range Space

Related tags

Deep LearningEI
Overview

Equivariant Imaging: Learning Beyond the Range Space

arXiv GitHub Stars

Equivariant Imaging: Learning Beyond the Range Space

Dongdong Chen, Julián Tachella, Mike E. Davies.

The University of Edinburgh

In ICCV 2021 (oral)

flexible flexible Figure: Learning to image from only measurements. Training an imaging network through just measurement consistency (MC) does not significantly improve the reconstruction over the simple pseudo-inverse (). However, by enforcing invariance in the reconstructed image set, equivariant imaging (EI) performs almost as well as a fully supervised network. Top: sparse view CT reconstruction, Bottom: pixel inpainting. PSNR is shown in top right corner of the images.

EI is a new self-supervised, end-to-end and physics-based learning framework for inverse problems with theoretical guarantees which leverages simple but fundamental priors about natural signals: symmetry and low-dimensionality.

Get quickly started

  • Please find the blog post for a quick introduction of EI.
  • Please find the core implementation of EI at './ei/closure/ei.py' (ei.py).
  • Please find the 30 lines code get_started.py and the toy cs example to get started with EI.

Overview

The problem: Imaging systems capture noisy measurements of a signal through a linear operator + . We aim to learn the reconstruction function where

  • NO groundtruth data for training as most inverse problems don’t have ground-truth;
  • only a single forward operator is available;
  • has a non-trivial nullspace (e.g. ).

The challenge:

  • We have NO information about the signal set outside the range space of or .
  • It is IMPOSSIBLE to learn the signal set using alone.

The motivation:

We assume the signal set has a low-dimensional structure and is invariant to a groups of transformations (orthgonal matrix, e.g. shift, rotation, scaling, reflection, etc.) related to a group , such that and the sets and are the same. For example,

  • natural images are shift invariant.
  • in CT/MRI data, organs can be imaged at different angles making the problem invariant to rotation.

Key observations:

  • Invariance provides access to implicit operators with potentially different range spaces: where and . Obviously, should also in the signal set.
  • The composition is equivariant to the group of transformations : .

overview Figure: Learning with and without equivariance in a toy 1D signal inpainting task. The signal set consists of different scaling of a triangular signal. On the left, the dataset does not enjoy any invariance, and hence it is not possible to learn the data distribution in the nullspace of . In this case, the network can inpaint the signal in an arbitrary way (in green), while achieving zero data consistency loss. On the right, the dataset is shift invariant. The range space of is shifted via the transformations , and the network inpaints the signal correctly.

Equivariant Imaging: to learn by using only measurements , all you need is to:

  • Define:
  1. define a transformation group based on the certain invariances to the signal set.
  2. define a neural reconstruction function , e.g. where is the (approximated) pseudo-inverse of and is a UNet-like neural net.
  • Calculate:
  1. calculate as the estimation of .
  2. calculate by transforming .
  3. calculate by reconstructing from its measurement .

flowchart

  • Train: finally learn the reconstruction function by solving: +

Requirements

All used packages are listed in the Anaconda environment.yml file. You can create an environment and run

conda env create -f environment.yml

Test

We provide the trained models used in the paper which can be downloaded at Google Drive. Please put the downloaded folder 'ckp' in the root path. Then evaluate the trained models by running

python3 demo_test_inpainting.py

and

python3 demo_test_ct.py

Train

To train EI for a given inverse problem (inpainting or CT), run

python3 demo_train.py --task 'inpainting'

or run a bash script to train the models for both CT and inpainting tasks.

bash train_paper_bash.sh

Train your models

To train your EI models on your dataset for a specific inverse problem (e.g. inpainting), run

python3 demo_train.py --h
  • Note: you may have to implement the forward model (physics) if you manage to solve a new inverse problem.
  • Note: you only need to specify some basic settings (e.g. the path of your training set).

Citation

@inproceedings{chen2021equivariant,
title = {Equivariant Imaging: Learning Beyond the Range Space},
	author={Chen, Dongdong and Tachella, Juli{\'a}n and Davies, Mike E},
	booktitle={Proceedings of the International Conference on Computer Vision (ICCV)},
	year = {2021}
}
Owner
Dongdong Chen
Machine learning, Inverse problems
Dongdong Chen
TinyML Cookbook, published by Packt

TinyML Cookbook This is the code repository for TinyML Cookbook, published by Packt. Author: Gian Marco Iodice Publisher: Packt About the book This bo

Packt 93 Dec 29, 2022
3D-aware GANs based on NeRF (arXiv).

CIPS-3D This repository will contain the code of the paper, CIPS-3D: A 3D-Aware Generator of GANs Based on Conditionally-Independent Pixel Synthesis.

Peterou 563 Dec 31, 2022
Official implementation of CVPR2020 paper "Deep Generative Model for Robust Imbalance Classification"

Deep Generative Model for Robust Imbalance Classification Deep Generative Model for Robust Imbalance Classification Xinyue Wang, Yilin Lyu, Liping Jin

9 Nov 01, 2022
This repository contains the source code for the paper Tutorial on amortized optimization for learning to optimize over continuous domains by Brandon Amos

Tutorial on Amortized Optimization This repository contains the source code for the paper Tutorial on amortized optimization for learning to optimize

Meta Research 144 Dec 26, 2022
Automatic self-diagnosis program (python required)Automatic self-diagnosis program (python required)

auto-self-checker 자동으로 자가진단 해주는 프로그램(python 필요) 중요 이 프로그램이 실행될때에는 절대로 마우스포인터를 움직이거나 키보드를 건드리면 안된다(화면인식, 마우스포인터로 직접 클릭) 사용법 프로그램을 구동할 폴더 내의 cmd창에서 pip

1 Dec 30, 2021
Multiple custom object count and detection using YOLOv3-Tiny method

Electronic-Component-YOLOv3 Introduce This project created to detect, count, and recognize multiple custom object using YOLOv3-Tiny method. The target

Derwin Mahardika 2 Nov 14, 2022
[CVPR2021] De-rendering the World's Revolutionary Artefacts

De-rendering the World's Revolutionary Artefacts Project Page | Video | Paper In CVPR 2021 Shangzhe Wu1,4, Ameesh Makadia4, Jiajun Wu2, Noah Snavely4,

49 Nov 06, 2022
Research using Cirq!

ReCirq Research using Cirq! This project contains modules for running quantum computing applications and experiments through Cirq and Quantum Engine.

quantumlib 230 Dec 29, 2022
Like a cowsay but without cows!

Foxsay This is a simple program that generates pictures of a cute fox with a message. It is like a cowsay but without cows! Fox girls are better! Usag

Anastasia Kim 28 Feb 20, 2022
Code for our WACV 2022 paper "Hyper-Convolution Networks for Biomedical Image Segmentation"

Hyper-Convolution Networks for Biomedical Image Segmentation Code for our WACV 2022 paper "Hyper-Convolution Networks for Biomedical Image Segmentatio

Tianyu Ma 17 Nov 02, 2022
JDet is Object Detection Framework based on Jittor.

JDet is Object Detection Framework based on Jittor.

135 Dec 14, 2022
Unsupervised clustering of high content screen samples

Microscopium Unsupervised clustering and dataset exploration for high content screens. See microscopium in action Public dataset BBBC021 from the Broa

60 Dec 05, 2022
Some methods for comparing network representations in deep learning and neuroscience.

Generalized Shape Metrics on Neural Representations In neuroscience and in deep learning, quantifying the (dis)similarity of neural representations ac

Alex Williams 45 Dec 27, 2022
DIRL: Domain-Invariant Representation Learning

DIRL: Domain-Invariant Representation Learning Domain-Invariant Representation Learning (DIRL) is a novel algorithm that semantically aligns both the

Ajay Tanwani 30 Nov 07, 2022
Trainable PyTorch reproduction of AlphaFold 2

OpenFold A faithful PyTorch reproduction of DeepMind's AlphaFold 2. Features OpenFold carefully reproduces (almost) all of the features of the origina

AQ Laboratory 1.7k Dec 29, 2022
IDA file loader for UF2, created for the DEFCON 29 hardware badge

UF2 Loader for IDA The DEFCON 29 badge uses the UF2 bootloader, which conveniently allows you to dump and flash the firmware over USB as a mass storag

Kevin Colley 6 Feb 08, 2022
Official PyTorch implementation of the preprint paper "Stylized Neural Painting", accepted to CVPR 2021.

Official PyTorch implementation of the preprint paper "Stylized Neural Painting", accepted to CVPR 2021.

Zhengxia Zou 1.5k Dec 28, 2022
[TPDS'21] COSCO: Container Orchestration using Co-Simulation and Gradient Based Optimization for Fog Computing Environments

COSCO Framework COSCO is an AI based coupled-simulation and container orchestration framework for integrated Edge, Fog and Cloud Computing Environment

imperial-qore 39 Dec 25, 2022
Deep learning image registration library for PyTorch

TorchIR: Pytorch Image Registration TorchIR is a image registration library for deep learning image registration (DLIR). I have integrated several ide

Bob de Vos 40 Dec 16, 2022
Text Summarization - WCN — Weighted Contextual N-gram method for evaluation of Text Summarization

Text Summarization WCN — Weighted Contextual N-gram method for evaluation of Text Summarization In this project, I fine tune T5 model on Extreme Summa

Aditya Shah 1 Jan 03, 2022