One Stop Anomaly Shop: Anomaly detection using two-phase approach: (a) pre-labeling using statistics, Natural Language Processing and static rules; (b) anomaly scoring using supervised and unsupervised machine learning.

Related tags

Text Data & NLPOSAS
Overview

One Stop Anomaly Shop (OSAS)

Quick start guide

Step 1: Get/build the docker image

Option 1: Use precompiled image (might not reflect latest changes):

docker pull tiberiu44/osas:latest
docker image tag tiberiu44/osas:latest osas:latest

Option 2: Build the image locally

git clone https://github.com/adobe/OSAS.git
cd OSAS
docker build . -f docker/osas-elastic/Dockerfile -t osas:latest

Step 2: After building the docker image you can start OSAS by typing:

docker run -p 8888:8888/tcp -p 5601:5601/tcp -v <ABSOLUTE PATH TO DATA FOLDER>:/app osas

IMPORTANT NOTE: Please modify the above command by adding the absolute path to your datafolder in the appropiate location

After OSAS has started (it might take 1-2 minutes) you can use your browser to access some standard endpoints:

For Debug (in case you need to):

docker run -p 8888:8888/tcp -p 5601:5601/tcp -v <ABSOLUTE PATH TO DATA FOLDER>:/app -ti osas /bin/bash

Building the test pipeline

This guide will take you through all the necessary steps to configure, train and run your own pipeline on your own dataset.

Prerequisite: Add you own CSV dataset into your data-folder (the one provided in the docker run command)

Once you started your docker image, use the OSAS console to gain CLI access to all the tools.

In what follows, we assume that your dataset is called dataset.csv. Please update the commands as necessary in case you use a different name/location.

Be sure you are running scripts in the root folder of OSAS:

cd /osas

Step 1: Build a custom pipeline configuration file - this can be done fully manually on by bootstraping using our conf autogenerator script:

python3 osas/main/autoconfig.py --input-file=/app/dataset.csv --output-file=/app/dataset.conf

The above command will generate a custom configuration file for your dataset. It will try guess field types and optimal combinations between fields. You can edit the generated file (which should be available in the shared data-folder), using your favourite editor.

Standard templates for label generator types are:

[LG_MULTINOMIAL]
generator_type = MultinomialField
field_name = <FIELD_NAME>
absolute_threshold = 10
relative_threshold = 0.1

[LG_TEXT]
generator_type = TextField
field_name = <FIELD_NAME>
lm_mode = char
ngram_range = (3, 5)

[LG_NUMERIC]
generator_type = NumericField
field_name = <FIELD_NAME>

[LG_MUTLINOMIAL_COMBINER]
generator_type = MultinomialFieldCombiner
field_names = ['<FIELD_1>', '<FIELD_2>', ...]
absolute_threshold = 10
relative_threshold = 0.1

[LG_KEYWORD]
generator_type = KeywordBased
field_name = <FIELD_NAME>
keyword_list = ['<KEYWORD_1>', '<KEYWORD_2>', '<KEYWORD_3>', ...]

[LG_REGEX]
generator_type = KnowledgeBased
field_name = <FIELD_NAME>
rules_and_labels_tuple_list = [('<REGEX_1>','<LABEL_1>'), ('<REGEX_2>','<LABEL_2>'), ...]

You can use the above templates to add as many label generators you want. Just make sure that the header IDs are unique in the configuration file.

Step 2: Train the pipeline

python3 osas/main/train_pipeline --conf-file=/app/dataset.conf --input-file=/app/dataset.csv --model-file=/app/dataset.json

The above command will generate a pretrained pipeline using the previously created configuration file and the dataset

Step 3: Run the pipeline on a dataset

python3 osas/main/run_pipeline --conf-file=/app/dataset.conf --model-file=/app/dataset.json --input-file=/app/dataset.csv --output-file=/app/dataset-out.csv

The above command will run the pretrained pipeline on any compatible dataset. In the example we run the pipeline on the training data, but you can use previously unseen data. It will generate an output file with labels and anomaly scores and it will also import your data into Elasticsearch/Kibana. To view the result just use the the web interface.

Pipeline explained

The pipeline sequentially applies all label generators on the raw data, collects the labels and uses an anomaly scoring algorithm to generate anomaly scores. There are two main component classes: LabelGenerator and ScoringAlgorithm.

Label generators

NumericField

  • This type of LabelGenerator handles numerical fields. It computes the mean and standard deviation and generates labels according to the distance between the current value and the mean value (value<=sigma NORMAL, sigma<value<=2sigma BORDERLINE, 2sigma<value OUTLIER)

Params:

  • field_name: what field to look for in the data object

TextField

  • This type of LabelGenerator handles text fields. It builds a n-gram based language model and computes the perplexity of newly observed data. It also holds statistics over the training data (mean and stdev). (perplexity<=sigma NORMAL, sigma<preplexity<=2sigma BORDERLINE, 2perplexity<value OUTLIER)

Params:

  • field_name: What field to look for
  • lm_mode: Type of LM to build: char or token
  • ngram_range: N-gram range to use for computation

MultinomialField

  • This type of LabelGenerator handles fields with discreet value sets. It computes the probability of seeing a specific value and alerts based on relative and absolute thresholds.

Params

  • field_name: What field to use
  • absolute_threshold: Minimum absolute value for occurrences to trigger alert for
  • relative_threshold: Minimum relative value for occurrences to trigger alert for

MultinomialFieldCombiner

  • This type of LabelGenerator handles fields with discreet value sets and build advanced features by combining values across the same dataset entry. It computes the probability of seeing a specific value and alerts based on relative and absolute thresholds.

Params

  • field_names: What fields to combine
  • absolute_threshold: Minimum absolute value for occurrences to trigger alert for
  • relative_threshold: Minimum relative value for occurrences to trigger alert for

KeywordBased

  • This is a rule-based label generators. It applies a simple tokenization procedure on input text, by dropping special characters and numbers and splitting on white-space. It then looks for a specific set of keywords and generates labels accordingly

Params:

  • field_name: What field to use
  • keyword_list: The list of keywords to look for

OSAS has four unsupervised anomaly detection algorithms:

  • IFAnomaly: n-hot encoding, singular value decomposition, isolation forest (IF)

  • LOFAnomaly: n-hot encoding, singular value decomposition, local outlier factor (LOF)

  • SVDAnomaly: n-hot encoding, singular value decomposition, inverted transform, input reconstruction error

  • StatisticalNGramAnomaly: compute label n-gram probabilities, compute anomaly score as a sum of negative log likelihood

Owner
Adobe, Inc.
Open source from Adobe
Adobe, Inc.
Sentiment Analysis Project using Count Vectorizer and TF-IDF Vectorizer

Sentiment Analysis Project This project contains two sentiment analysis programs for Hotel Reviews using a Hotel Reviews dataset from Datafiniti. The

Simran Farrukh 0 Mar 28, 2022
Implementaion of our ACL 2022 paper Bridging the Data Gap between Training and Inference for Unsupervised Neural Machine Translation

Bridging the Data Gap between Training and Inference for Unsupervised Neural Machine Translation This is the implementaion of our paper: Bridging the

hezw.tkcw 20 Dec 12, 2022
Chinese Grammatical Error Diagnosis

nlp-CGED Chinese Grammatical Error Diagnosis 中文语法纠错研究 基于序列标注的方法 所需环境 Python==3.6 tensorflow==1.14.0 keras==2.3.1 bert4keras==0.10.6 笔者使用了开源的bert4keras

12 Nov 25, 2022
Nmt - TensorFlow Neural Machine Translation Tutorial

Neural Machine Translation (seq2seq) Tutorial Authors: Thang Luong, Eugene Brevdo, Rui Zhao (Google Research Blogpost, Github) This version of the tut

6.1k Dec 29, 2022
Legal text retrieval for python

legal-text-retrieval Overview This system contains 2 steps: generate training data containing negative sample found by mixture score of cosine(tfidf)

Nguyễn Minh Phương 22 Dec 06, 2022
Задания КЕГЭ по информатике 2021 на Python

КЕГЭ 2021 на Python В этом репозитории мои решения типовых заданий КЕГЭ по информатике в 2021 году, БЕСПЛАТНО! Задания Взяты с https://inf-ege.sdamgia

8 Oct 13, 2022
An extension for asreview implements a version of the tf-idf feature extractor that saves the matrix and the vocabulary.

Extension - matrix and vocabulary extractor for TF-IDF and Doc2Vec An extension for ASReview that adds a tf-idf extractor that saves the matrix and th

ASReview 4 Jun 17, 2022
voice2json is a collection of command-line tools for offline speech/intent recognition on Linux

Command-line tools for speech and intent recognition on Linux

Michael Hansen 988 Jan 04, 2023
Transformers4Rec is a flexible and efficient library for sequential and session-based recommendation, available for both PyTorch and Tensorflow.

Transformers4Rec is a flexible and efficient library for sequential and session-based recommendation, available for both PyTorch and Tensorflow.

730 Jan 09, 2023
edge-SR: Super-Resolution For The Masses

edge-SR: Super Resolution For The Masses Citation Pablo Navarrete Michelini, Yunhua Lu and Xingqun Jiang. "edge-SR: Super-Resolution For The Masses",

Pablo 40 Nov 10, 2022
PORORO: Platform Of neuRal mOdels for natuRal language prOcessing

PORORO: Platform Of neuRal mOdels for natuRal language prOcessing pororo performs Natural Language Processing and Speech-related tasks. It is easy to

Kakao Brain 1.2k Dec 21, 2022
An Open-Source Package for Neural Relation Extraction (NRE)

OpenNRE We have a DEMO website (http://opennre.thunlp.ai/). Try it out! OpenNRE is an open-source and extensible toolkit that provides a unified frame

THUNLP 3.9k Jan 03, 2023
BiNE: Bipartite Network Embedding

BiNE: Bipartite Network Embedding This repository contains the demo code of the paper: BiNE: Bipartite Network Embedding. Ming Gao, Leihui Chen, Xiang

leihuichen 214 Nov 24, 2022
HuggingSound: A toolkit for speech-related tasks based on HuggingFace's tools

HuggingSound HuggingSound: A toolkit for speech-related tasks based on HuggingFace's tools. I have no intention of building a very complex tool here.

Jonatas Grosman 247 Dec 26, 2022
Twewy-discord-chatbot - Build a Discord AI Chatbot that Speaks like Your Favorite Character

Build a Discord AI Chatbot that Speaks like Your Favorite Character! This is a Discord AI Chatbot that uses the Microsoft DialoGPT conversational mode

Lynn Zheng 231 Dec 30, 2022
The SVO-Probes Dataset for Verb Understanding

The SVO-Probes Dataset for Verb Understanding This repository contains the SVO-Probes benchmark designed to probe for Subject, Verb, and Object unders

DeepMind 20 Nov 30, 2022
AIDynamicTextReader - A simple dynamic text reader based on Artificial intelligence

AI Dynamic Text Reader: This is a simple dynamic text reader based on Artificial

Md. Rakibul Islam 1 Jan 18, 2022
🍊 PAUSE (Positive and Annealed Unlabeled Sentence Embedding), accepted by EMNLP'2021 🌴

PAUSE: Positive and Annealed Unlabeled Sentence Embedding Sentence embedding refers to a set of effective and versatile techniques for converting raw

EQT 21 Dec 15, 2022
Model parallel transformers in JAX and Haiku

Table of contents Mesh Transformer JAX Updates Pretrained Models GPT-J-6B Links Acknowledgments License Model Details Zero-Shot Evaluations Architectu

Ben Wang 4.9k Jan 04, 2023
Exploring dimension-reduced embeddings

sleepwalk Exploring dimension-reduced embeddings This is the code repository. See here for the Sleepwalk web page. License and disclaimer This program

S. Anders's research group at ZMBH 91 Nov 29, 2022