WORD: Revisiting Organs Segmentation in the Whole Abdominal Region

Overview

WORD: Revisiting Organs Segmentation in the Whole Abdominal Region (Paper and DataSet).

  • [New] Note that all the emails about the download permission of WORD will be handled after the paper is accepted, all information will be updated in time in this repo, please don't send them multiple times!!!
  • This repo provides the codebase and dataset of work WORD: Revisiting Organs Segmentation in the Whole Abdominal Region, and the download requirement will be approved after the paper is accepted, stay tuned !!!
  • Now, we are preparing an online evaluation server for the fair and open research if you have experience with it or want to join or provide some support to this project, please contact us !!!
  • Some information about the WORD dataset is presented in the following:
Fig. 1. An example in the WORD dataset.
Fig. 2. Volume distribution or each organ in the WORD dataset.
Fig. 3. User study based on three junior oncologists independently, each of them comes from a different hospital.

DataSet

Please contact Xiangde (luoxd1996 AT gmail DOT com) for the dataset. Two steps are needed to download and access the dataset: 1) using your google email to apply for the download permission; 2) using your affiliation email to get the unzip password. We will get back to you after the paper is accepted. We just handle the real-name email and your email suffix must match your affiliation. The email should contain the following information:

Name/Homepage/Google Scholar: (Tell us who you are.)
Primary Affiliation: (The name of your institution or university, etc.)
Job Title: (E.g., Professor, Associate Professor, Ph.D., etc.)
Affiliation Email: (the password will be sent to this email, we just reply to the email which is the end of "edu".)
How to use: (Only for academic research, not for commercial use or second-development.)

In addition, this work is still ongoing, the WORD dataset will be extended to larger and more diverse (more patients, more organs, and more modalities, more clinical hospitals' data and MR Images will be considered to include future), any suggestion, comment, collaboration, and sponsor are welcome.

Acknowledgment and Statement

  • This dataset belongs to the Healthcare Intelligence Laboratory at University of Electronic Science and Technology of China and is licensed under the GNU General Public License v3.0.
  • This project has been approved by the privacy and ethical review committee. We thank all collaborators for the data collection, annotation, checking, and user study!
  • This project and dataset were designed for open-available academic research, not for clinical, commercial, second-development, or other use. In addition, if you used it for your academic research, you are encouraged to release the code and the pre-trained model.
  • The interesting and memorable name WORD is suggested by Dr. Jie-Neng, thanks a lot !!!

Citation

It would be highly appreciated if you cite our paper when using the WORD dataset or code:

@article{luo2021word,
  title={{WORD}: Revisiting Organs Segmentation in the Whole Abdominal Region},
  author={Luo, Xiangde and Liao, Wenjun and Xiao, Jianghong and Song, Tao and Zhang, Xiaofan and Li, Kang and Wang, Guotai and Zhang, Shaoting},
  journal={arXiv preprint arXiv:2111.02403},
  year={2021}
}
Owner
Healthcare Intelligence Laboratory
Healthcare Intelligence Laboratory
FaRL for Facial Representation Learning

FaRL for Facial Representation Learning This repo hosts official implementation of our paper General Facial Representation Learning in a Visual-Lingui

Microsoft 19 Jan 05, 2022
The official repository for Deep Image Matting with Flexible Guidance Input

FGI-Matting The official repository for Deep Image Matting with Flexible Guidance Input. Paper: https://arxiv.org/abs/2110.10898 Requirements easydict

Hang Cheng 51 Nov 10, 2022
Probabilistic Tensor Decomposition of Neural Population Spiking Activity

Probabilistic Tensor Decomposition of Neural Population Spiking Activity Matlab (recommended) and Python (in developement) implementations of Soulat e

Hugo Soulat 6 Nov 30, 2022
LexGLUE: A Benchmark Dataset for Legal Language Understanding in English

LexGLUE: A Benchmark Dataset for Legal Language Understanding in English ⚖️ 🏆 🧑‍🎓 👩‍⚖️ Dataset Summary Inspired by the recent widespread use of th

95 Dec 08, 2022
[ICML 2021] DouZero: Mastering DouDizhu with Self-Play Deep Reinforcement Learning | 斗地主AI

[ICML 2021] DouZero: Mastering DouDizhu with Self-Play Deep Reinforcement Learning DouZero is a reinforcement learning framework for DouDizhu (斗地主), t

Kwai Inc. 3.1k Jan 04, 2023
Video Frame Interpolation without Temporal Priors (a general method for blurry video interpolation)

Video Frame Interpolation without Temporal Priors (NeurIPS2020) [Paper] [video] How to run Prerequisites NVIDIA GPU + CUDA 9.0 + CuDNN 7.6.5 Pytorch 1

YoujianZhang 31 Sep 04, 2022
Code for the ACL2021 paper "Lexicon Enhanced Chinese Sequence Labelling Using BERT Adapter"

Lexicon Enhanced Chinese Sequence Labeling Using BERT Adapter Code and checkpoints for the ACL2021 paper "Lexicon Enhanced Chinese Sequence Labelling

274 Dec 06, 2022
A Free and Open Source Python Library for Multiobjective Optimization

Platypus What is Platypus? Platypus is a framework for evolutionary computing in Python with a focus on multiobjective evolutionary algorithms (MOEAs)

Project Platypus 424 Dec 18, 2022
This repository is for DSA and CP scripts for reference.

dsa-script-collections This Repo is the collection of DSA and CP scripts for reference. Contents Python Bubble Sort Insertion Sort Merge Sort Quick So

Aditya Kumar Pandey 9 Nov 22, 2022
AntiFuzz: Impeding Fuzzing Audits of Binary Executables

AntiFuzz: Impeding Fuzzing Audits of Binary Executables Get the paper here: https://www.usenix.org/system/files/sec19-guler.pdf Usage: The python scri

Chair for Sys­tems Se­cu­ri­ty 88 Dec 21, 2022
Unofficial Pytorch Lightning implementation of Contrastive Syn-to-Real Generalization (ICLR, 2021)

Unofficial Pytorch Lightning implementation of Contrastive Syn-to-Real Generalization (ICLR, 2021)

Gyeongjae Choi 17 Sep 23, 2021
:hot_pepper: R²SQL: "Dynamic Hybrid Relation Network for Cross-Domain Context-Dependent Semantic Parsing." (AAAI 2021)

R²SQL The PyTorch implementation of paper Dynamic Hybrid Relation Network for Cross-Domain Context-Dependent Semantic Parsing. (AAAI 2021) Requirement

huybery 60 Dec 31, 2022
Using LSTM to detect spoofing attacks in an Air-Ground network

Using LSTM to detect spoofing attacks in an Air-Ground network Specifications IDE: Spider Packages: Tensorflow 2.1.0 Keras NumPy Scikit-learn Matplotl

Tiep M. H. 1 Nov 20, 2021
[WWW 2021] Source code for "Graph Contrastive Learning with Adaptive Augmentation"

GCA Source code for Graph Contrastive Learning with Adaptive Augmentation (WWW 2021) For example, to run GCA-Degree under WikiCS, execute: python trai

Big Data and Multi-modal Computing Group, CRIPAC 97 Jan 07, 2023
GeneralOCR is open source Optical Character Recognition based on PyTorch.

Introduction GeneralOCR is open source Optical Character Recognition based on PyTorch. It makes a fidelity and useful tool to implement SOTA models on

57 Dec 29, 2022
Code for the ICML 2021 paper: "ViLT: Vision-and-Language Transformer Without Convolution or Region Supervision"

ViLT Code for the paper: "ViLT: Vision-and-Language Transformer Without Convolution or Region Supervision" Install pip install -r requirements.txt pip

Wonjae Kim 922 Jan 01, 2023
Official implementation for paper Render In-between: Motion Guided Video Synthesis for Action Interpolation

Render In-between: Motion Guided Video Synthesis for Action Interpolation [Paper] [Supp] [arXiv] [4min Video] This is the official Pytorch implementat

8 Oct 27, 2022
A Pytorch Implementation of [Source data‐free domain adaptation of object detector through domain

A Pytorch Implementation of Source data‐free domain adaptation of object detector through domain‐specific perturbation Please follow Faster R-CNN and

1 Dec 25, 2021
Local Attention - Flax module for Jax

Local Attention - Flax Autoregressive Local Attention - Flax module for Jax Install $ pip install local-attention-flax Usage from jax import random fr

Phil Wang 16 Jun 16, 2022
PyTorch implementation of UNet++ (Nested U-Net).

PyTorch implementation of UNet++ (Nested U-Net) This repository contains code for a image segmentation model based on UNet++: A Nested U-Net Architect

4ui_iurz1 642 Jan 04, 2023