Generate knowledge graphs with interesting geometries, like lattices

Overview

Geometric Graphs

Tests Cookiecutter template from @cthoyt PyPI PyPI - Python Version PyPI - License Documentation Status Code style: black

Generate knowledge graphs with interesting geometries, like lattices. Works on Python 3.9+ because it uses cool new features. Get out of that 2020 funk and install the most recent version of Python.

💪 Getting Started

See https://github.com/cthoyt/translational-toys for example usage to generate charts like

.

🚀 Installation

The most recent release can be installed from PyPI with:

$ pip install geometric_graphs

The most recent code and data can be installed directly from GitHub with:

$ pip install git+https://github.com/cthoyt/geometric-graphs.git

To install in development mode, use the following:

$ git clone git+https://github.com/cthoyt/geometric-graphs.git
$ cd geometric-graphs
$ pip install -e .

👐 Contributing

Contributions, whether filing an issue, making a pull request, or forking, are appreciated. See CONTRIBUTING.rst for more information on getting involved.

👋 Attribution

⚖️ License

The code in this package is licensed under the MIT License.

🍪 Cookiecutter

This package was created with @audreyfeldroy's cookiecutter package using @cthoyt's cookiecutter-snekpack template.

🛠️ For Developers

See developer instrutions

The final section of the README is for if you want to get involved by making a code contribution.

Testing

After cloning the repository and installing tox with pip install tox, the unit tests in the tests/ folder can be run reproducibly with:

$ tox

Additionally, these tests are automatically re-run with each commit in a GitHub Action.

📦 Making a Release

After installing the package in development mode and installing tox with pip install tox, the commands for making a new release are contained within the finish environment in tox.ini. Run the following from the shell:

$ tox -e finish

This script does the following:

  1. Uses BumpVersion to switch the version number in the setup.cfg and src/geometric_graphs/version.py to not have the -dev suffix
  2. Packages the code in both a tar archive and a wheel
  3. Uploads to PyPI using twine. Be sure to have a .pypirc file configured to avoid the need for manual input at this step
  4. Push to GitHub. You'll need to make a release going with the commit where the version was bumped.
  5. Bump the version to the next patch. If you made big changes and want to bump the version by minor, you can use tox -e bumpversion minor after.
Owner
Charles Tapley Hoyt
Bio/cheminformatician, open scientist, maintainer of @pybel and @pykeen, part of @indralab (he/him)
Charles Tapley Hoyt
Learning Convolutional Neural Networks with Interactive Visualization.

CNN Explainer An interactive visualization system designed to help non-experts learn about Convolutional Neural Networks (CNNs) For more information,

Polo Club of Data Science 6.3k Jan 01, 2023
Data parsing and validation using Python type hints

pydantic Data validation and settings management using Python type hinting. Fast and extensible, pydantic plays nicely with your linters/IDE/brain. De

Samuel Colvin 12.1k Jan 06, 2023
Productivity Tools for Plotly + Pandas

Cufflinks This library binds the power of plotly with the flexibility of pandas for easy plotting. This library is available on https://github.com/san

Jorge Santos 2.7k Dec 30, 2022
With Holoviews, your data visualizes itself.

HoloViews Stop plotting your data - annotate your data and let it visualize itself. HoloViews is an open-source Python library designed to make data a

HoloViz 2.3k Jan 04, 2023
A programming language built on top of Python to easily allow Swahili speakers to get started with programming without ever knowing English

pyswahili A programming language built over Python to easily allow swahili speakers to get started with programming without ever knowing english pyswa

Jordan Kalebu 72 Dec 15, 2022
Make visual music sheets for thatskygame (graphical representations of the Sky keyboard)

sky-python-music-sheet-maker This program lets you make visual music sheets for Sky: Children of the Light. It will ask you a few questions, and does

21 Aug 26, 2022
plotly scatterplots which show molecule images on hover!

molplotly Plotly scatterplots which show molecule images on hovering over the datapoints! Required packages: pandas rdkit jupyter_dash ➡️ See example.

150 Dec 28, 2022
Some examples with MatPlotLib library in Python

MatPlotLib Example Some examples with MatPlotLib library in Python Point: Run files only in project's directory About me Full name: Matin Ardestani Ag

Matin Ardestani 4 Mar 29, 2022
Import, visualize, and analyze SpiderFoot OSINT data in Neo4j, a graph database

SpiderFoot Neo4j Tools Import, visualize, and analyze SpiderFoot OSINT data in Neo4j, a graph database Step 1: Installation NOTE: This installs the sf

Black Lantern Security 42 Dec 26, 2022
Browse Dash docsets inside emacs

Helm Dash What's it This package uses Dash docsets inside emacs to browse documentation. Here's an article explaining the basic usage of it. It doesn'

504 Dec 15, 2022
A python visualization of the A* path finding algorithm

A python visualization of the A* path finding algorithm. It allows you to pick your start, end location and make obstacles and then view the process of finding the shortest path. You can also choose

Kimeon 4 Aug 02, 2022
Fractals plotted on MatPlotLib in Python.

About The Project Learning more about fractals through the process of visualization. Built With Matplotlib Numpy License This project is licensed unde

Akeel Ather Medina 2 Aug 30, 2022
Fast scatter density plots for Matplotlib

About Plotting millions of points can be slow. Real slow... 😴 So why not use density maps? ⚡ The mpl-scatter-density mini-package provides functional

Thomas Robitaille 473 Dec 12, 2022
Sprint planner considering JIRA issues and google calendar meetings schedule.

Sprint planner Sprint planner is a Python script for planning your Jira tasks based on your calendar availability. Installation Use the package manage

Apptension 2 Dec 05, 2021
Python code for solving 3D structural problems using the finite element method

3DFEM Python 3D finite element code This python code allows for solving 3D structural problems using the finite element method. New features will be a

Rémi Capillon 6 Sep 29, 2022
Data Visualizer for Super Mario Kart (SNES)

Data Visualizer for Super Mario Kart (SNES)

MrL314 21 Nov 20, 2022
100 Days of Code The Complete Python Pro Bootcamp for 2022

100-Day-With-Python 100 Days of Code - The Complete Python Pro Bootcamp for 2022. In this course, I spend with python language over 100 days, and I up

Rajdip Das 8 Jun 22, 2022
A little word cloud generator in Python

Linux macOS Windows PyPI word_cloud A little word cloud generator in Python. Read more about it on the blog post or the website. The code is tested ag

Andreas Mueller 9.2k Dec 30, 2022
Homework 2: Matplotlib and Data Visualization

Homework 2: Matplotlib and Data Visualization Overview These data visualizations were created for my introductory computer science course using Python

Sophia Huang 12 Oct 20, 2022
This is a web application to visualize various famous technical indicators and stocks tickers from user

Visualizing Technical Indicators Using Python and Plotly. Currently facing issues hosting the application on heroku. As soon as I am able to I'll like

4 Aug 04, 2022