Tools for the analysis, simulation, and presentation of Lorentz TEM data.

Related tags

Data Analysisltempy
Overview

ltempy

ltempy is a set of tools for Lorentz TEM data analysis, simulation, and presentation.

Features

  • Single Image Transport of Intensity Equation (SITIE) reconstruction
  • simulations - calculations of phase, B, A, image
  • basic image processing - high_pass, low_pass, clipping
  • a matplotlib.pyplot wrapper tailored to presenting induction maps and Lorentz data
  • an implementation of the CIELAB colorspace
  • module-wide unit scaling (i.e., working in nm rather than m)

Installation

python -m pip install ltempy

Documentation

Documentation is available at https://mcmorranlab.github.io/ltempy/.

Tests

Tests are split into two subdirectories:

  1. tests These are typical unit tests, that assert that functions return the right shape, beam parameters return the right values, etc. Run with pytest.
  2. devtests These are tests of the actual functionality, that require a trained eye to evaluate. Run as normal .py scripts.

The rationale for devtests is that this package is math-heavy, so it's highly possible for the code to run fine, but be wrong. The easiest way to test for this is to check base cases where the developer knows what to look for.

Owner
McMorran Lab
Custom software used by the McMorran Lab, University of Oregon Department of Physics
McMorran Lab
Instant search for and access to many datasets in Pyspark.

SparkDataset Provides instant access to many datasets right from Pyspark (in Spark DataFrame structure). Drop a star if you like the project. 😃 Motiv

Souvik Pratiher 31 Dec 16, 2022
An extension to pandas dataframes describe function.

pandas_summary An extension to pandas dataframes describe function. The module contains DataFrameSummary object that extend describe() with: propertie

Mourad 450 Dec 30, 2022
Pandas-based utility to calculate weighted means, medians, distributions, standard deviations, and more.

weightedcalcs weightedcalcs is a pandas-based Python library for calculating weighted means, medians, standard deviations, and more. Features Plays we

Jeremy Singer-Vine 98 Dec 31, 2022
The Dash Enterprise App Gallery "Oil & Gas Wells" example

This app is based on the Dash Enterprise App Gallery "Oil & Gas Wells" example. For more information and more apps see: Dash App Gallery See the Dash

Austin Caudill 1 Nov 08, 2021
PyPDC is a Python package for calculating asymptotic Partial Directed Coherence estimations for brain connectivity analysis.

Python asymptotic Partial Directed Coherence and Directed Coherence estimation package for brain connectivity analysis. Free software: MIT license Doc

Heitor Baldo 3 Nov 26, 2022
Tools for the analysis, simulation, and presentation of Lorentz TEM data.

ltempy ltempy is a set of tools for Lorentz TEM data analysis, simulation, and presentation. Features Single Image Transport of Intensity Equation (SI

McMorran Lab 1 Dec 26, 2022
talkbox is a scikit for signal/speech processing, to extend scipy capabilities in that domain.

talkbox is a scikit for signal/speech processing, to extend scipy capabilities in that domain.

David Cournapeau 76 Nov 30, 2022
A utility for functional piping in Python that allows you to access any function in any scope as a partial.

WithPartial Introduction WithPartial is a simple utility for functional piping in Python. The package exposes a context manager (used with with) calle

Michael Milton 1 Oct 26, 2021
pipeline for migrating lichess data into postgresql

How Long Does It Take Ordinary People To "Get Good" At Chess? TL;DR: According to 5.5 years of data from 2.3 million players and 450 million games, mo

Joseph Wong 182 Nov 11, 2022
track your GitHub statistics

GitHub-Stalker track your github statistics 👀 features find new followers or unfollowers find who got a star on your project or remove stars find who

Bahadır Araz 34 Nov 18, 2022
Python Project on Pro Data Analysis Track

Udacity-BikeShare-Project: Python Project on Pro Data Analysis Track Basic Data Exploration with pandas on Bikeshare Data Basic Udacity project using

Belal Mohammed 0 Nov 10, 2021
t-SNE and hierarchical clustering are popular methods of exploratory data analysis, particularly in biology.

tree-SNE t-SNE and hierarchical clustering are popular methods of exploratory data analysis, particularly in biology. Building on recent advances in s

Isaac Robinson 61 Nov 21, 2022
Sensitivity Analysis Library in Python (Numpy). Contains Sobol, Morris, Fractional Factorial and FAST methods.

Sensitivity Analysis Library (SALib) Python implementations of commonly used sensitivity analysis methods. Useful in systems modeling to calculate the

SALib 663 Jan 05, 2023
Analytical view of olist e-commerce in Brazil

Analysis of E-Commerce Public Dataset by Olist The objective of this project is to propose an analytical view of olist e-commerce in Brazil. For this

Gurpreet Singh 1 Jan 11, 2022
Open-Domain Question-Answering for COVID-19 and Other Emergent Domains

Open-Domain Question-Answering for COVID-19 and Other Emergent Domains This repository contains the source code for an end-to-end open-domain question

7 Sep 27, 2022
BinTuner is a cost-efficient auto-tuning framework, which can deliver a near-optimal binary code that reveals much more differences than -Ox settings.

BinTuner is a cost-efficient auto-tuning framework, which can deliver a near-optimal binary code that reveals much more differences than -Ox settings. it also can assist the binary code analysis rese

BinTuner 42 Dec 16, 2022
Falcon: Interactive Visual Analysis for Big Data

Falcon: Interactive Visual Analysis for Big Data Crossfilter millions of records without latencies. This project is work in progress and not documente

Vega 803 Dec 27, 2022
TheMachineScraper 🐱‍👤 is an Information Grabber built for Machine Analysis

TheMachineScraper 🐱‍👤 is a tool made purely for analysing machine data for any reason.

doop 5 Dec 01, 2022
A 2-dimensional physics engine written in Cairo

A 2-dimensional physics engine written in Cairo

Topology 38 Nov 16, 2022
Kennedy Institute of Rheumatology University of Oxford Project November 2019

TradingBot6M Kennedy Institute of Rheumatology University of Oxford Project November 2019 Run Change api.txt to binance api key: https://www.binance.c

Kannan SAR 2 Nov 16, 2021