prior-based-losses-for-medical-image-segmentation

Overview

Repository for papers:

Benchmark: Effect of Prior-based Losses on Segmentation Performance: A Benchmark

Midl: A Surprisingly Effective Perimeter-based Loss for Medical Image Segmentation (https://openreview.net/forum?id=NDEmtyb4cXu)

In the .py script losses you can find all the losses used in the benchmark as well as the Contour-based loss.

You can just plugin the name of the loss in the losses argument in the main script and run the program.

TO DO \

  • Code should be cleaned and divided into project compartements . \
  • Functions should be documented
  • Documentation should be provided !!!
Owner
Rosana EL JURDI
Rosana EL JURDI
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

Bayesian Methods for Hackers Using Python and PyMC The Bayesian method is the natural approach to inference, yet it is hidden from readers behind chap

Cameron Davidson-Pilon 25.1k Jan 02, 2023
User-friendly bulk RNAseq deconvolution using simulated annealing

Welcome to cellanneal - The user-friendly application for deconvolving omics data sets. cellanneal is an application for deconvolving biological mixtu

11 Dec 16, 2022
Official implementation of the ICCV 2021 paper: "The Power of Points for Modeling Humans in Clothing".

The Power of Points for Modeling Humans in Clothing (ICCV 2021) This repository contains the official PyTorch implementation of the ICCV 2021 paper: T

Qianli Ma 158 Nov 24, 2022
The repository contains reproducible PyTorch source code of our paper Generative Modeling with Optimal Transport Maps, ICLR 2022.

Generative Modeling with Optimal Transport Maps The repository contains reproducible PyTorch source code of our paper Generative Modeling with Optimal

Litu Rout 30 Dec 22, 2022
Unofficial PyTorch implementation of MobileViT.

MobileViT Overview This is a PyTorch implementation of MobileViT specified in "MobileViT: Light-weight, General-purpose, and Mobile-friendly Vision Tr

Chin-Hsuan Wu 348 Dec 23, 2022
MiniHack the Planet: A Sandbox for Open-Ended Reinforcement Learning Research

MiniHack the Planet: A Sandbox for Open-Ended Reinforcement Learning Research

Facebook Research 338 Dec 29, 2022
Pytorch implementation of the paper "COAD: Contrastive Pre-training with Adversarial Fine-tuning for Zero-shot Expert Linking."

Expert-Linking Pytorch implementation of the paper "COAD: Contrastive Pre-training with Adversarial Fine-tuning for Zero-shot Expert Linking." This is

BoChen 12 Jan 01, 2023
Encode and decode text application

Text Encoder and Decoder Encode and decode text in many ways using this application! Encode in: ASCII85 Base85 Base64 Base32 Base16 Url MD5 Hash SHA-1

Alice 1 Feb 12, 2022
An intuitive library to extract features from time series

Time Series Feature Extraction Library Intuitive time series feature extraction This repository hosts the TSFEL - Time Series Feature Extraction Libra

Associação Fraunhofer Portugal Research 589 Jan 04, 2023
Sign-to-Speech for Sign Language Understanding: A case study of Nigerian Sign Language

Sign-to-Speech for Sign Language Understanding: A case study of Nigerian Sign Language This repository contains the code, model, and deployment config

16 Oct 23, 2022
TraSw for FairMOT - A Single-Target Attack example (Attack ID: 19; Screener ID: 24):

TraSw for FairMOT A Single-Target Attack example (Attack ID: 19; Screener ID: 24): Fig.1 Original Fig.2 Attacked By perturbing only two frames in this

Derry Lin 21 Dec 21, 2022
[TPDS'21] COSCO: Container Orchestration using Co-Simulation and Gradient Based Optimization for Fog Computing Environments

COSCO Framework COSCO is an AI based coupled-simulation and container orchestration framework for integrated Edge, Fog and Cloud Computing Environment

imperial-qore 39 Dec 25, 2022
Norm-based Analysis of Transformer

Norm-based Analysis of Transformer Implementations for 2 papers introducing to analyze Transformers using vector norms: Kobayashi+'20 Attention is Not

Goro Kobayashi 52 Dec 05, 2022
Official PyTorch implementation for "Low Precision Decentralized Distributed Training with Heterogenous Data"

Low Precision Decentralized Training with Heterogenous Data Official PyTorch implementation for "Low Precision Decentralized Distributed Training with

Aparna Aketi 0 Nov 23, 2021
BankNote-Net: Open dataset and encoder model for assistive currency recognition

BankNote-Net: Open Dataset for Assistive Currency Recognition Millions of people around the world have low or no vision. Assistive software applicatio

Microsoft 13 Oct 28, 2022
Code needed to reproduce the examples found in "The Temporal Robustness of Stochastic Signals"

The Temporal Robustness of Stochastic Signals Code needed to reproduce the examples found in "The Temporal Robustness of Stochastic Signals" Case stud

0 Oct 28, 2021
8-week curriculum for AI Builders

curriculum 8-week curriculum for AI Builders สารบัญ บทที่ 1 - Machine Learning คืออะไร บทที่ 2 - ชุดข้อมูลมหัศจรรย์และถิ่นที่อยู่ บทที่ 3 - Stochastic

AI Builders 134 Jan 03, 2023
Implementation of "GNNAutoScale: Scalable and Expressive Graph Neural Networks via Historical Embeddings" in PyTorch

PyGAS: Auto-Scaling GNNs in PyG PyGAS is the practical realization of our G NN A uto S cale (GAS) framework, which scales arbitrary message-passing GN

Matthias Fey 139 Dec 25, 2022
Regulatory Instruments for Fair Personalized Pricing.

Fair pricing Source code for WWW 2022 paper Regulatory Instruments for Fair Personalized Pricing. Installation Requirements Linux with Python = 3.6 p

Renzhe Xu 6 Oct 26, 2022
AlphaBot2 Pi Core software for interfacing with the various components.

AlphaBot2-Pi-Core AlphaBot2 Pi Core software for interfacing with the various components. This project is currently a W.I.P. I will update this readme

KyleDev 1 Feb 13, 2022