Make GIFs from time-stacked xarray.DataArrays (time, [optional band], y, x), dead-simple.

Overview

GeoGIF

Documentation Status

Make GIFs from time-stacked xarray.DataArrays (time, [optional band], y, x), dead-simple.

from geogif import gif, dgif
gif(data_array)
dgif(dask_data_array).compute()

Animation of shoreline moving on the coast of Cape Cod

The "geo" part is a lie, actually. The arrays don't have to be geospatial in nature. But I called it GeoGIF because:

  1. Wanting to animate a time-stack of imagery (like you'd get from stackstac) is a common task in the earth-observation/geospatial world.
  2. I think GeoGIF is a hilarious idea1.

1: To ruin the joke, it sounds like GeoTIFF, a ubiquitous geospatial image format. If you also think this is a funny idea, and believe you'd have a better use for the name than I do, I'd happily cede it to you.

Installation

pip install geogif

Documentation

See https://geogif.readthedocs.io/en/latest/.

Development

GeoGIF is managed by Poetry, so be sure that's installed first. To develop locally, first fork or clone the repo. Then, to set up a virtual environment and install the necessary dependencies:

cd geogif
poetry install -E tests -E docs

Running Tests

GeoGIF has some basic end-to-end tests, written with Hypothesis. To run:

pytest

This will take ~30 seconds (longer the first time), as Hypothesis generates fake data to root out possible errors.

Code style

GeoGIF is formatted with shed, in order to allow for as few opinions as possible.

Comments
  • Bump pillow from 9.0.0 to 9.0.1

    Bump pillow from 9.0.0 to 9.0.1

    Bumps pillow from 9.0.0 to 9.0.1.

    Release notes

    Sourced from pillow's releases.

    9.0.1

    https://pillow.readthedocs.io/en/stable/releasenotes/9.0.1.html

    Changes

    • In show_file, use os.remove to remove temporary images. CVE-2022-24303 #6010 [@​radarhere, @​hugovk]
    • Restrict builtins within lambdas for ImageMath.eval. CVE-2022-22817 #6009 [radarhere]
    Changelog

    Sourced from pillow's changelog.

    9.0.1 (2022-02-03)

    • In show_file, use os.remove to remove temporary images. CVE-2022-24303 #6010 [radarhere, hugovk]

    • Restrict builtins within lambdas for ImageMath.eval. CVE-2022-22817 #6009 [radarhere]

    Commits
    • 6deac9e 9.0.1 version bump
    • c04d812 Update CHANGES.rst [ci skip]
    • 4fabec3 Added release notes for 9.0.1
    • 02affaa Added delay after opening image with xdg-open
    • ca0b585 Updated formatting
    • 427221e In show_file, use os.remove to remove temporary images
    • c930be0 Restrict builtins within lambdas for ImageMath.eval
    • 75b69dd Dont need to pin for GHA
    • cd938a7 Autolink CWE numbers with sphinx-issues
    • 2e9c461 Add CVE IDs
    • See full diff in compare view

    Dependabot compatibility score

    Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


    Dependabot commands and options

    You can trigger Dependabot actions by commenting on this PR:

    • @dependabot rebase will rebase this PR
    • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
    • @dependabot merge will merge this PR after your CI passes on it
    • @dependabot squash and merge will squash and merge this PR after your CI passes on it
    • @dependabot cancel merge will cancel a previously requested merge and block automerging
    • @dependabot reopen will reopen this PR if it is closed
    • @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
    • @dependabot ignore this major version will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)
    • @dependabot ignore this minor version will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)
    • @dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)
    • @dependabot use these labels will set the current labels as the default for future PRs for this repo and language
    • @dependabot use these reviewers will set the current reviewers as the default for future PRs for this repo and language
    • @dependabot use these assignees will set the current assignees as the default for future PRs for this repo and language
    • @dependabot use this milestone will set the current milestone as the default for future PRs for this repo and language

    You can disable automated security fix PRs for this repo from the Security Alerts page.

    dependencies 
    opened by dependabot[bot] 1
  • please remove python version limit

    please remove python version limit

    hi,

    looks like great tool! I tried to install it using pip, but got error: ERROR: Package 'geogif-0.1.2' requires a different Python: 3.7.6 not in '>=3.8,<4.0'

    could you please remove the strict dependency on python 3.7.6 ?

    thank you

    opened by espiritocz 1
  • Bump Pillow to 9.0, support 2022 Dask

    Bump Pillow to 9.0, support 2022 Dask

    Bump Pillow to 9.0 due to multiple vulnerabilities: https://github.com/advisories/GHSA-xrcv-f9gm-v42c, https://github.com/advisories/GHSA-8vj2-vxx3-667w, https://github.com/advisories/GHSA-pw3c-h7wp-cvhx

    Closes #4

    opened by gjoseph92 0
  • Support dask>=2022

    Support dask>=2022

    Our dask dependency won't allow us to go beyond 2021: https://github.com/gjoseph92/stackstac/blob/b1172defb8dc30c8502316f73228a42428f76753/pyproject.toml#L18

    Bump this and cut a release.

    opened by gjoseph92 0
  • Loosen version restrictions

    Loosen version restrictions

    Necessary for https://github.com/gjoseph92/stackstac/issues/51. We have to do a crazy dance because of https://github.com/python-poetry/poetry/issues/697.

    This lockfile is out of date. I've manually overridden pyproject.toml to an unsolveable state in order to bump the xarray version and cut a release. This will be resolved in a future commit.

    opened by gjoseph92 0
  • CLI Execution

    CLI Execution

    This is super slick! I love how quick and easy it is. Any interest in an install-able little executable we could just run from the CLI?

    geogif ./my_data.nc:TMP_2M ./out.gif

    Something like that?

    opened by four43 2
Releases(v0.1.3)
  • v0.1.3(Mar 17, 2022)

    Changelog: https://github.com/gjoseph92/geogif/blob/main/CHANGELOG.md#013-2022-03-16

    Full Changelog: https://github.com/gjoseph92/geogif/compare/v0.1.2...v0.1.3

    Source code(tar.gz)
    Source code(zip)
  • v0.1.2(Jan 20, 2022)

Pixel Brush Processing Unit

Pixel Brush Processing Unit The Pixel Brush Processing Unit (PBPU for short) is a simple 4-Bit CPU I designed in Logisim while I was still in school a

Pixel Brush 2 Nov 03, 2022
A suite of useful tools based on 3D interactivity in napari

napari-threedee A suite of useful tools based on 3D interactivity in napari This napari plugin was generated with Cookiecutter using @napari's cookiec

11 Dec 14, 2022
Qt based ebook reader

Qt based ebook reader Currently supports: pdf epub djvu fb2 mobi azw / azw3 / azw4 cbr / cbz md Contribute Paypal Bitcoin: 17jaxj26vFJNqQ2hEVerbBV5fpT

1.4k Dec 26, 2022
Open source software for image correlation, distance and analysis

Douglas-Quaid Project Open source software for image correlation, distance and analysis. Strongly related to : Carl-Hauser Problem statement (@CIRCL)

Dominik Dancs 2 May 01, 2022
Image manipulation package used for EpicBot.

Image manipulation package used for EpicBot.

Nirlep_5252_ 7 May 26, 2022
Repair broken bookmarks to referenced files in Apple Photos

Repair Apple Photos Bookmarks Work in progress to repair file location bookmarks in Apple Photos. Background Starting in macOS 10.15/Catalina, photos

Rhet Turnbull 10 Nov 03, 2022
Python scripts for semi-automated morphometric analysis of atolls from Landsat satellite Imagery.

AtollGeoMorph Python scripts for semi-automated morphometric analysis of atolls from Landsat satellite Imagery. The python scripts included allow user

1 Dec 16, 2022
Magic-Square - Creates a magic square by randomly generating a list until the list happens to be a magic square

Magic-Square Creates a magic square by randomly generating a list until the list happens to be a magic square. Done as simply as possible... Frequentl

Nick 2 Jan 01, 2022
MyPaint is a simple drawing and painting program that works well with Wacom-style graphics tablets.

MyPaint A fast and dead-simple painting app for artists Features Infinite canvas Extremely configurable brushes Distraction-free fullscreen mode Exten

MyPaint 2.3k Jan 01, 2023
QSIprep: Preprocessing and analysis of q-space images

QSIprep: Preprocessing and analysis of q-space images Full documentation at https://qsiprep.readthedocs.io About qsiprep configures pipelines for proc

Lifespan Informatics and Neuroimaging Center 88 Dec 15, 2022
Detecting haze image with hazer.

hazer-py Detecting haze image with hazer. What is hazer Hazer is a lib for getting "haze degree". This repository is python version of hazer: https://

Joey777210 2 Dec 27, 2021
Computer art based on quadtrees.

Quads Computer art based on quadtrees. The program targets an input image. The input image is split into four quadrants. Each quadrant is assigned an

Michael Fogleman 1.1k Dec 23, 2022
kikuchipy is an open-source Python library for processing and analysis of electron backscatter diffraction (EBSD) patterns

kikuchipy is an open-source Python library for processing and analysis of electron backscatter diffraction (EBSD) patterns. The library builds on the

pyxem 53 Dec 29, 2022
A sketch like(?) effect for images

lineArt A sketch like(?) effect for images How to run main.py [filename] [option {1,2}] option 1 retains colour option 2 gives gray image #results ori

1 Oct 28, 2021
Extract the temperature data of each wire from the thermal imager raw data.

Wire-Tempurature-Detection Extract the temperature data of each wire from the thermal imager raw data. The motivation of this computer vision project

JohanAckerman 1 Nov 03, 2021
:rocket: A minimalist comic reader

Pynocchio A minimalist comic reader Features | Installation | Contributing | Credits This screenshots contains a page of the webcomic Pepper&Carrot by

Michell Stuttgart 73 Aug 02, 2022
With this simple py script you will be able to get all the .png from a folder and generate a yml for Oraxen

Oraxen-item-to-yml With this simple py script you will be able to get all the .png from a folder and generate a yml for Oraxen How to use Install the

Akex 1 Dec 29, 2021
Generative Art Synthesizer - a python program that generates python programs that generates generative art

GAS - Generative Art Synthesizer Generative Art Synthesizer - a python program that generates python programs that generates generative art. Examples

Alexey Borsky 43 Dec 03, 2022
Napari simpleitk image processing

napari-simpleitk-image-processing (n-SimpleITK) Process images using SimpleITK in napari Usage Filters of this napari plugin can be found in the Tools

Robert Haase 11 Dec 19, 2022