Neuroanalysis

Modular and interactive tools for analysis of neurophysiology data, with emphasis on patch-clamp electrophysiology.

• Functions for running common analysis algorithms
  • Synaptic/calcium event detection and characterization
  • Synaptic release modeling
  • VC and CC spike detection and characterization
  • VC and CC test pulse analysis
  • Basic signal processing (filtering, baseline removal, etc.)
• Data abstraction layer to allow adapting new data formats (see neuroanalysis/data.py)
• Re-usable user interface elements for implementing common analysis tasks

Status

This project is early in development and does not yet have a stable API. Issues and pull requests are accepted (see CONTRIBUTING.md), but may not be reviewed or accepted on any fixed schedule.