University Challenge 2021 With Python

Overview

University Challenge 2021

This repository contains:

  • The TeX file of the technical write-up describing the University / HYPER Challenge 2021 under latex-doc/
  • The Python starter-kit for the competition
  • The Docker starter-kit for the competition with the Python starter-kit inside

Option 1: Hypergraph partitioning using Python

The Python starter-kit is located under hg_tools/. Please see the README.md file within that folder for further instructions. The partition output file is written under hg_tools/output/.

Option 2: Hypergraph partitioning using Docker

The following instructions show a reproducible execution of the Docker starter-kit.

Dependencies

You must first have installed docker and docker-compose.

Datasets

You need to copy your datasets under hg_tools/data/ folder.

Build and run within a docker container

To build, type

docker-compose build

To run, type

docker-compose run hg_tools data/sample.mtx 2 0.01
# docker-compose run hg_tools data/CurlCurl_4.mtx.gz 10 0.01
# docker-compose run hg_tools data/wikipedia-20070206.mtx.gz 10 0.01

The partition output file is written under docker-output/.

This repo is dedicated to the data extraction and manipulation of the World Bank's database called STEP.

Overview Welcome to the Step-X repository. This repo is dedicated to the data extraction and manipulation of the World Bank's database called STEP. Be

Keanu Pang 0 Jan 20, 2022
Analyzing Earth Observation (EO) data is complex and solutions often require custom tailored algorithms.

eo-grow Earth observation framework for scaled-up processing in Python. Analyzing Earth Observation (EO) data is complex and solutions often require c

Sentinel Hub 18 Dec 23, 2022
ETL flow framework based on Yaml configs in Python

ETL framework based on Yaml configs in Python A light framework for creating data streams. Setting up streams through configuration in the Yaml file.

Павел Максимов 18 Jul 06, 2022
Transform-Invariant Non-Negative Matrix Factorization

Transform-Invariant Non-Negative Matrix Factorization A comprehensive Python package for Non-Negative Matrix Factorization (NMF) with a focus on learn

EMD Group 6 Jul 01, 2022
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. You write a high level configuration file specifying your in

Blue Collar Bioinformatics 917 Jan 03, 2023
This program analyzes a DNA sequence and outputs snippets of DNA that are likely to be protein-coding genes.

This program analyzes a DNA sequence and outputs snippets of DNA that are likely to be protein-coding genes.

1 Dec 28, 2021
BErt-like Neurophysiological Data Representation

BENDR BErt-like Neurophysiological Data Representation This repository contains the source code for reproducing, or extending the BERT-like self-super

114 Dec 23, 2022
Desafio proposto pela IGTI em seu bootcamp de Cloud Data Engineer

Desafio Modulo 4 - Cloud Data Engineer Bootcamp - IGTI Objetivos Criar infraestrutura como código Utuilizando um cluster Kubernetes na Azure Ingestão

Otacilio Filho 4 Jan 23, 2022
SNV calling pipeline developed explicitly to process individual or trio vcf files obtained from Illumina based pipeline (grch37/grch38).

SNV Pipeline SNV calling pipeline developed explicitly to process individual or trio vcf files obtained from Illumina based pipeline (grch37/grch38).

East Genomics 1 Nov 02, 2021
fds is a tool for Data Scientists made by DAGsHub to version control data and code at once.

Fast Data Science, AKA fds, is a CLI for Data Scientists to version control data and code at once, by conveniently wrapping git and dvc

DAGsHub 359 Dec 22, 2022
apricot implements submodular optimization for the purpose of selecting subsets of massive data sets to train machine learning models quickly.

Please consider citing the manuscript if you use apricot in your academic work! You can find more thorough documentation here. apricot implements subm

Jacob Schreiber 457 Dec 20, 2022
International Space Station data with Python research 🌎

International Space Station data with Python research 🌎 Plotting ISS trajectory, calculating the velocity over the earth and more. Plotting trajector

Facundo Pedaccio 41 Jun 16, 2022
Data-sets from the survey and analysis

bachelor-thesis "Umfragewerte.xlsx" contains the orginal survey results. "umfrage_alle.csv" contains the survey results but one participant is cancele

1 Jan 26, 2022
Amundsen is a metadata driven application for improving the productivity of data analysts, data scientists and engineers when interacting with data.

Amundsen is a metadata driven application for improving the productivity of data analysts, data scientists and engineers when interacting with data.

Amundsen 3.7k Jan 03, 2023
A set of procedures that can realize covid19 virus detection based on blood.

A set of procedures that can realize covid19 virus detection based on blood.

Nuyoah-xlh 3 Mar 07, 2022
Data analysis and visualisation projects from a range of individual projects and applications

Python-Data-Analysis-and-Visualisation-Projects Data analysis and visualisation projects from a range of individual projects and applications. Python

Tom Ritman-Meer 1 Jan 25, 2022
PCAfold is an open-source Python library for generating, analyzing and improving low-dimensional manifolds obtained via Principal Component Analysis (PCA).

PCAfold is an open-source Python library for generating, analyzing and improving low-dimensional manifolds obtained via Principal Component Analysis (PCA).

Burn Research 4 Oct 13, 2022
PyPDC is a Python package for calculating asymptotic Partial Directed Coherence estimations for brain connectivity analysis.

Python asymptotic Partial Directed Coherence and Directed Coherence estimation package for brain connectivity analysis. Free software: MIT license Doc

Heitor Baldo 3 Nov 26, 2022
Analyzing Covid-19 Outbreaks in Ontario

My group and I took Covid-19 outbreak statistics from ontario, and analyzed them to find different patterns and future predictions for the virus

Vishwaajeeth Kamalakkannan 0 Jan 20, 2022
PATC: Introduction to Big Data Analytics. Practical Data Analytics for Solving Real World Problems

PATC: Introduction to Big Data Analytics. Practical Data Analytics for Solving Real World Problems

1 Feb 07, 2022