This is the code repository for Interpretable Machine Learning with Python, published by Packt.

Overview

Interpretable Machine Learning with Python

Interpretable Machine Learning with Pythone

This is the code repository for Interpretable Machine Learning with Python, published by Packt.

Learn to build interpretable high-performance models with hands-on real-world examples

What is this book about?

Do you want to understand your models and mitigate the risks associated with poor predictions using practical machine learning (ML) interpretation? Interpretable Machine Learning with Python can help you overcome these challenges, using interpretation methods to build fairer and safer ML models.

This book covers the following exciting features:

  • Recognize the importance of interpretability in business
  • Study models that are intrinsically interpretable such as linear models, decision trees, and Naïve Bayes
  • Become well-versed in interpreting models with model-agnostic methods
  • Visualize how an image classifier works and what it learns
  • Understand how to mitigate the influence of bias in datasets

If you feel this book is for you, get your copy today!

https://www.packtpub.com/

Instructions and Navigations

All of the code is organized into folders. For example, Chapter02.

The code will look like the following:

base_classifier = KerasClassifier(model=base_model,\
                                  clip_values=(min_, max_))
y_test_mdsample_prob = np.max(y_test_prob[sampl_md_idxs],\
                                                       axis=1)
y_test_smsample_prob = np.max(y_test_prob[sampl_sm_idxs],\
                                                       axis=1)

Following is what you need for this book: This book is for data scientists, machine learning developers, and data stewards who have an increasingly critical responsibility to explain how the AI systems they develop work, their impact on decision making, and how they identify and manage bias. Working knowledge of machine learning and the Python programming language is expected.

With the following software and hardware list you can run all code files present in the book (Chapter 1-14).

Software and Hardware List

You can install the software required in any operating system by first installing Jupyter Notebook or Jupyter Lab with the most recent version of Python, or install Anaconda which can install everything at once. While hardware requirements for Jupyter are relatively modest, we recommend a machine with at least 4 cores of 2Ghz and 8Gb of RAM.

Alternatively, to installing the software locally, you can run the code in the cloud using Google Colab or another cloud notebook service.

Either way, the following packages are required to run the code in all the chapters (Google Colab has all the packages denoted with a ^):

Chapter Software required OS required
1 - 13 ^ Python 3.6+ Windows, Mac OS X, and Linux (Any)
1 - 13 ^ matplotlib 3.2.2+ Windows, Mac OS X, and Linux (Any)
1 - 13 ^ scikit-learn 0.22.2+ Windows, Mac OS X, and Linux (Any)
1 - 12 ^ pandas 1.1.5+ Windows, Mac OS X, and Linux (Any)
2 - 13 machine-learning-datasets 0.01.16+ Windows, Mac OS X, and Linux (Any)
2 - 13 ^ numpy 1.19.5+ Windows, Mac OS X, and Linux (Any)
3 - 13 ^ seaborn 0.11.1+ Windows, Mac OS X, and Linux (Any)
3 - 13 ^ tensorflow 2.4.1+ Windows, Mac OS X, and Linux (Any)
5 - 12 shap 0.38.1+ Windows, Mac OS X, and Linux (Any)
1, 5, 10, 12 ^ scipy 1.4.1+ Windows, Mac OS X, and Linux (Any)
5, 10-12 ^ xgboost 0.90+ Windows, Mac OS X, and Linux (Any)
6, 11, 12 ^ lightgbm 2.2.3+ Windows, Mac OS X, and Linux (Any)
7 - 9 alibi 0.5.5+ Windows, Mac OS X, and Linux (Any)
10 - 13 ^ tqdm 4.41.1+ Windows, Mac OS X, and Linux (Any)
2, 9 ^ statsmodels 0.10.2+ Windows, Mac OS X, and Linux (Any)
3, 5 rulefit 0.3.1+ Windows, Mac OS X, and Linux (Any)
6, 8 lime 0.2.0.1+ Windows, Mac OS X, and Linux (Any)
7, 12 catboost 0.24.4+ Windows, Mac OS X, and Linux (Any)
8, 9 ^ Keras 2.4.3+ Windows, Mac OS X, and Linux (Any)
11, 12 ^ pydot 1.3.0+ Windows, Mac OS X, and Linux (Any)
11, 12 xai 0.0.4+ Windows, Mac OS X, and Linux (Any)
1 ^ beautifulsoup4 4.6.3+ Windows, Mac OS X, and Linux (Any)
1 ^ requests 2.23.0+ Windows, Mac OS X, and Linux (Any)
3 cvae 0.0.3+ Windows, Mac OS X, and Linux (Any)
3 interpret 0.2.2+ Windows, Mac OS X, and Linux (Any)
3 ^ six 1.15.0+ Windows, Mac OS X, and Linux (Any)
3 skope-rules 1.0.1+ Windows, Mac OS X, and Linux (Any)
4 PDPbox 0.2.0+ Windows, Mac OS X, and Linux (Any)
4 pycebox 0.0.1+ Windows, Mac OS X, and Linux (Any)
5 alepython 0.1+ Windows, Mac OS X, and Linux (Any)
5 tensorflow-docs 0.0.02+ Windows, Mac OS X, and Linux (Any)
6 ^ nltk 3.2.5+ Windows, Mac OS X, and Linux (Any)
7 witwidget 1.7.0+ Windows, Mac OS X, and Linux (Any)
8 ^ opencv-python 4.1.2.30+ Windows, Mac OS X, and Linux (Any)
8 ^ scikit-image 0.16.2+ Windows, Mac OS X, and Linux (Any)
8 tf-explain 0.2.1+ Windows, Mac OS X, and Linux (Any)
8 tf-keras-vis 0.5.5+ Windows, Mac OS X, and Linux (Any)
9 SALib 1.3.12+ Windows, Mac OS X, and Linux (Any)
9 distython 0.0.3+ Windows, Mac OS X, and Linux (Any)
10 ^ mlxtend 0.14.0+ Windows, Mac OS X, and Linux (Any)
10 sklearn-genetic 0.3.0+ Windows, Mac OS X, and Linux (Any)
11 aif360==0.3.0 Windows, Mac OS X, and Linux (Any)
11 BlackBoxAuditing==0.1.54 Windows, Mac OS X, and Linux (Any)
11 dowhy 0.5.1+ Windows, Mac OS X, and Linux (Any)
11 econml 0.9.0+ Windows, Mac OS X, and Linux (Any)
11 ^ networkx 2.5+ Windows, Mac OS X, and Linux (Any)
12 bayesian-optimization 1.2.0+ Windows, Mac OS X, and Linux (Any)
12 ^ graphviz 0.10.1+ Windows, Mac OS X, and Linux (Any)
12 tensorflow-lattice 2.0.7+ Windows, Mac OS X, and Linux (Any)
13 adversarial-robustness-toolbox 1.5.0+ Windows, Mac OS X, and Linux (Any)

NOTE: the library machine-learning-datasets is the official name of what in the book is referred to as mldatasets. Due to naming conflicts, it had to be changed.

The exact versions of each library, as tested, can be found in the requirements.txt file and installed like this should you have a dedicated environment for them:

> pip install -r requirements.txt

You might get some conflicts specifically with libraries cvae, alepython, pdpbox and xai. If this is the case, try:

> pip install --no-deps -r requirements.txt

Alternatively, you can install libraries one chapter at a time inside of a local Jupyter environment using cells with !pip install or run all the code in Google Colab with the following links:

Remember to make sure you click on the menu item "File > Save a copy in Drive" as soon you open each link to ensure that your notebook is saved as you run it. Also, notebooks denoted with plus sign (+) are relatively compute-intensive, and will take an extremely long time to run on Google Colab but if you must go to "Runtime > Change runtime type" and select "High-RAM" for runtime shape. Otherwise, a better cloud enviornment or local environment is preferable.

We also provide a PDF file that has color images of the screenshots/diagrams used in this book. Click here to download it.

Summary

The book does much more than explain technical topics, but here's a summary of the chapters:

Chapters topics

Related products

Get to Know the Authors

Serg Masís has been at the confluence of the internet, application development, and analytics for the last two decades. Currently, he's a Climate and Agronomic Data Scientist at Syngenta, a leading agribusiness company with a mission to improve global food security. Before that role, he co-founded a startup, incubated by Harvard Innovation Labs, that combined the power of cloud computing and machine learning with principles in decision-making science to expose users to new places and events. Whether it pertains to leisure activities, plant diseases, or customer lifetime value, Serg is passionate about providing the often-missing link between data and decision-making — and machine learning interpretation helps bridge this gap more robustly.

Owner
Packt
Providing books, eBooks, video tutorials, and articles for IT developers, administrators, and users.
Packt
Apache Spark & Python (pySpark) tutorials for Big Data Analysis and Machine Learning as IPython / Jupyter notebooks

Spark Python Notebooks This is a collection of IPython notebook/Jupyter notebooks intended to train the reader on different Apache Spark concepts, fro

Jose A Dianes 1.5k Jan 02, 2023
A mindmap summarising Machine Learning concepts, from Data Analysis to Deep Learning.

A mindmap summarising Machine Learning concepts, from Data Analysis to Deep Learning.

Daniel Formoso 5.7k Dec 30, 2022
MLR - Machine Learning Research

Machine Learning Research 1. Project Topic 1.1. Exsiting research Benmark: https://paperswithcode.com/sota ACL anthology for NLP papers: http://www.ac

Charles 69 Oct 20, 2022
Classification based on Fuzzy Logic(C-Means).

CMeans_fuzzy Classification based on Fuzzy Logic(C-Means). Table of Contents About The Project Fuzzy CMeans Algorithm Built With Getting Started Insta

Armin Zolfaghari Daryani 3 Feb 08, 2022
Cool Python features for machine learning that I used to be too afraid to use. Will be updated as I have more time / learn more.

python-is-cool A gentle guide to the Python features that I didn't know existed or was too afraid to use. This will be updated as I learn more and bec

Chip Huyen 3.3k Jan 05, 2023
A simple machine learning package to cluster keywords in higher-level groups.

Simple Keyword Clusterer A simple machine learning package to cluster keywords in higher-level groups. Example: "Senior Frontend Engineer" -- "Fronte

Andrea D'Agostino 10 Dec 18, 2022
A Python Package to Tackle the Curse of Imbalanced Datasets in Machine Learning

imbalanced-learn imbalanced-learn is a python package offering a number of re-sampling techniques commonly used in datasets showing strong between-cla

6.2k Jan 01, 2023
Given the names and grades for each student in a class N of students, store them in a nested list and print the name(s) of any student(s) having the second lowest grade.

Hackerank-Nested-List Given the names and grades for each student in a class N of students, store them in a nested list and print the name(s) of any s

Sangeeth Mathew John 2 Dec 14, 2021
fMRIprep Pipeline To Machine Learning

fMRIprep Pipeline To Machine Learning(Demo) 所有配置均在config.py文件下定义 前置环境(lilab) 各个节点均安装docker,并有fmripre的镜像 可以使用conda中的base环境(相应的第三份包之后更新) 1. fmriprep scr

Alien 3 Mar 08, 2022
BentoML is a flexible, high-performance framework for serving, managing, and deploying machine learning models.

Model Serving Made Easy BentoML is a flexible, high-performance framework for serving, managing, and deploying machine learning models. Supports multi

BentoML 4.4k Jan 04, 2023
A Python package to preprocess time series

Disclaimer: This package is WIP. Do not take any APIs for granted. tspreprocess Time series can contain noise, may be sampled under a non fitting rate

Maximilian Christ 57 Dec 17, 2022
This is an auto-ML tool specialized in detecting of outliers

Auto-ML tool specialized in detecting of outliers Description This tool will allows you, with a Dash visualization, to compare 10 models of machine le

1 Nov 03, 2021
Decentralized deep learning in PyTorch. Built to train models on thousands of volunteers across the world.

Hivemind: decentralized deep learning in PyTorch Hivemind is a PyTorch library to train large neural networks across the Internet. Its intended usage

1.3k Jan 08, 2023
XGBoost-Ray is a distributed backend for XGBoost, built on top of distributed computing framework Ray.

XGBoost-Ray is a distributed backend for XGBoost, built on top of distributed computing framework Ray.

92 Dec 14, 2022
An implementation of Relaxed Linear Adversarial Concept Erasure (RLACE)

Background This repository contains an implementation of Relaxed Linear Adversarial Concept Erasure (RLACE). Given a dataset X of dense representation

Shauli Ravfogel 4 Apr 13, 2022
Contains an implementation (sklearn API) of the algorithm proposed in "GENDIS: GEnetic DIscovery of Shapelets" and code to reproduce all experiments.

GENDIS GENetic DIscovery of Shapelets In the time series classification domain, shapelets are small subseries that are discriminative for a certain cl

IDLab Services 90 Oct 28, 2022
Kubeflow is a machine learning (ML) toolkit that is dedicated to making deployments of ML workflows on Kubernetes simple, portable, and scalable.

SDK: Overview of the Kubeflow pipelines service Kubeflow is a machine learning (ML) toolkit that is dedicated to making deployments of ML workflows on

Kubeflow 3.1k Jan 06, 2023
Extended Isolation Forest for Anomaly Detection

Table of contents Extended Isolation Forest Summary Motivation Isolation Forest Extension The Code Installation Requirements Use Citation Releases Ext

Sahand Hariri 377 Dec 18, 2022
K-Means clusternig example with Python and Scikit-learn

Unsupervised-Machine-Learning Flat Clustering K-Means clusternig example with Python and Scikit-learn Flat clustering Clustering algorithms group a se

Emin 1 Dec 13, 2021
OptaPy is an AI constraint solver for Python to optimize planning and scheduling problems.

OptaPy is an AI constraint solver for Python to optimize the Vehicle Routing Problem, Employee Rostering, Maintenance Scheduling, Task Assignment, School Timetabling, Cloud Optimization, Conference S

OptaPy 208 Dec 27, 2022